Rv0006 - c.1575C>T


Drug resistance types
89 Sensitive 6 RR-TB 18 HR-TB 9 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 61 Other
lineage Counts
lineage Count
lineage4.9 44
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1.1 4
lineage7 78
La1.7;M.canetti;lineage4.9 4
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.5 1
La1.7 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7;lineage4.9 5
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.1.2 1
lineage1.1.2 1
lineage1.1.1.1 1
lineage1;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.4.2 1
La1.7.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.2.1 3
lineage4.3.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.8.1 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4 1
lineage4.3.2.1 1
M.canetti;lineage4.9 1
lineage4.3.4.2.1 1
lineage2.2.1.2 1
M.canetti;lineage4.2 1
lineage4.8;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 184
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR212125 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1971864 Sensitive lineage7 et
ERR1971872 Sensitive lineage7 et
SRR6046485 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR1200624 Sensitive lineage7 et
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR1971871 Sensitive lineage7 et
ERR1971869 Other lineage7 et
ERR176778 HR-TB lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
ERR1971861 Sensitive lineage7 et
SRR3675222 Other La1.7 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR736872 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR1200633 Sensitive lineage7 et
ERR1200610 Sensitive lineage7 et
ERR1063896 Sensitive None
ERR1971858 Sensitive lineage7 et
ERR1200617 Other lineage7 et
ERR159958 Sensitive lineage7 None
ERR1971855 Sensitive lineage7 et
ERR1200603 Sensitive lineage7 None
ERR502511 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341310 Other lineage1.1.2 None
ERR1971857 Other lineage7 et
ERR11043150 Sensitive lineage7 None
SRR5341300 HR-TB lineage4.9 None
DRR261097 Sensitive lineage1.1.1.1 None
ERR2704711 Sensitive lineage7 None
ERR4830353 Other La1.7 None
ERR4798099 Other lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR1200631 Sensitive lineage7 et
SRR3675446 RR-TB lineage4.9 None
ERR756345 Sensitive lineage7 None
ERR1200606 Sensitive lineage7 et
ERR1200634 Sensitive lineage7 et
ERR1200618 Sensitive lineage7 None
ERR1971873 Sensitive lineage7 et
ERR181887 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR1200604 Sensitive lineage7 et
ERR1971850 Sensitive lineage7 et
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SAMEA4791119 Sensitive lineage7 au
ERR751326 Other lineage4.9 None
ERR13267563 Sensitive lineage7 None
ERR176779 HR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR3323719 Sensitive lineage7 None
SRR27332343 Sensitive lineage7 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR1971862 Sensitive lineage7 et
SRR5341299 HR-TB lineage4.9 None
ERR756344 Sensitive lineage7 None
ERR4811857 Sensitive lineage4.3.3 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR1971877 Other lineage7 et
ERR233349 Other lineage7 None
ERR1200619 Sensitive lineage7 et
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR7240108 Other La1.8.1 None
ERR11049146 Sensitive lineage7 None
ERR11068109 Sensitive lineage7 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR137286 Other lineage4.9 None
ERR1971863 Sensitive lineage7 et
ERR1200640 Sensitive lineage7 et
ERR4819975 Sensitive lineage7 None
SRR1159378 Other lineage4.9 None
ERR11044943 Sensitive lineage7 None
ERR1200639 Sensitive lineage7 et
SRR3675501 Other La1.7;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1200625 Sensitive lineage7 et
ERR702405 Sensitive lineage4.9 None
ERR1971854 Sensitive lineage7 et
ERR756348 Sensitive lineage7 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR756346 Sensitive lineage7 None
SRR3675267 Other La1.7;lineage4.9 None
ERR1971860 Sensitive lineage7 et
ERR1971865 Sensitive lineage7 et
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR1971853 Other lineage7 et
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR7496471 Sensitive lineage4 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR1971868 Other lineage7 et
ERR1971870 Sensitive lineage7 et
SRR6045399 Other M.canetti;lineage4.9 None
ERR11068585 Sensitive lineage7 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341453 Other lineage4.9 None
ERR1200635 Sensitive lineage7 et
ERR1971852 Sensitive lineage7 et
ERR1971866 Other lineage7 et
SRR5341308 Sensitive lineage4.9 None
ERR1200602 Sensitive lineage7 et
SRR1172796 Sensitive lineage2.2.1.2 None
ERR181435 Sensitive lineage7 dj
ERR3797046 HR-TB lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR3675585 Sensitive lineage4.9 None
ERR1200623 Sensitive lineage7 et
ERR4024991 Other lineage4.8;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR400415 Sensitive lineage7 gb
ERR234681 Sensitive lineage7 None
ERR2704710 Sensitive lineage7 None
ERR1200636 Other lineage7 et
ERR1200608 Sensitive lineage7 et
ERR3283055 HR-TB lineage4.9 None
ERR1971859 Sensitive lineage7 et
ERR1971874 Sensitive lineage7 et
ERR6866022 Other lineage4.8;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4814968 Sensitive lineage7 gb
SRR7236177 Other La1.8.1 None
ERR176651 Other lineage4.9 None
ERR233355 Sensitive lineage7 None
ERR323066 Sensitive lineage4.9 None
ERR1971849 Sensitive lineage7 et
SRR18911237 Sensitive lineage7 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR7737753 MDR-TB lineage7 None
SRR5535933 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR233346 Sensitive lineage7 None
ERR756347 Sensitive lineage7 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR1200613 Sensitive lineage7 et
ERR2704695_ERR2704711_ERR2704710 Sensitive lineage7 None
ERR159959 Other lineage7 None
ERR1971856 Other lineage7 et
ERR124636 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1200612 Sensitive lineage7 et
ERR4596910 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR233354 Sensitive lineage7 None
ERR1023509 Other lineage4.9 None
ERR1971876 Sensitive lineage7 et
SRR3675488 Other La1.7;lineage4.9 None
ERR1971867 Other lineage7 et