lineage | Count |
---|---|
47 | |
lineage4.9 | 21 |
lineage4 | 23 |
lineage5.1.4 | 1 |
lineage4.1 | 2 |
lineage3 | 2 |
lineage4.1.1 | 1 |
lineage2.2.1 | 7 |
lineage4.2.1 | 1 |
lineage4.2.1.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.4.2 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2 | 4 |
lineage4.3.4.2.1 | 1 |
La1.2 | 1 |
lineage4.9;La1.3 | 1 |
La1.3 | 1 |
lineage4.5 | 2 |
lineage2.2.1.2 | 2 |
lineage4.3.4 | 1 |
lineage7;lineage2.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 123 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675510 | Other | None | SRR3675522 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2446566 | Other | lineage4.1 | None | ERR1035162 | Other | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR5341418 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341330 | HR-TB | None | ERR4820112 | Sensitive | lineage4.1.1 | None | SRR5535933 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517475 | Other | lineage4 | None | ERR2660539 | Other | lineage4.9 | None | SRR6046046 | Other | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046824 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | ERR502943 | HR-TB | None | ERR4831638 | Sensitive | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR502889 | Other | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR1063859 | HR-TB | None | ERR323045 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR133986 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR349330 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR373945 | HR-TB | lineage4 | None | ERR4769450 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4798406 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811493 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4812155 | Sensitive | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR176779 | HR-TB | None | SRR3675502 | Other | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None |
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