Rv0668 - c.3168G>A
Drug resistance types
21 Sensitive
3 RR-TB
16 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 32 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage4.3.4 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage2.2.1 | 6 |
| lineage2.2 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La1;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| lineage1;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| 1 | |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La2;lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 91 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046245 | Other | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR4820112 | Sensitive | lineage4.1.1.1 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR176779 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR3675387 | Other | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR12708416 | Sensitive | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
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