Rv0006 - c.1077C>T
Drug resistance types
12 Sensitive
2 RR-TB
12 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 20 |
| lineage4.4.2 | 1 |
| lineage2.2.1 | 6 |
| lineage4.9;lineage7 | 3 |
| lineage4.1.2.1 | 2 |
| La1.8.1 | 1 |
| lineage4.8.1 | 1 |
| lineage1.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage3 | 2 |
| lineage4.1.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La1;lineage4.9 | 2 |
| lineage2.2 | 1 |
| lineage4.9.1 | 1 |
| La3;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14782054 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR212123 | Other | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR26331611 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR7236294 | Other | La1.8.1 | None | SRR5535933 | Other | lineage4.9 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156817 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR9030460 | MDR-TB | lineage1.1.2 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798532 | MDR-TB | lineage3 | in | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4799025 | Other | lineage4.8 | None |
|---|
