Rv0006 - c.225G>C
Drug resistance types
47 Sensitive
13 RR-TB
92 HR-TB
29 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
114 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 153 |
| lineage2.2.1;lineage4 | 1 |
| La1.7;lineage4.9 | 10 |
| lineage4.9;lineage7 | 4 |
| La3;lineage4.9 | 9 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.1.2 | 2 |
| lineage4 | 6 |
| La1.7;M.canetti;lineage4.9 | 5 |
| M.canetti;lineage4.9 | 3 |
| La3;lineage4.3.4 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1 | 6 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 2 |
| lineage2.2.1.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.7 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.3.3 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.2.1 | 15 |
| lineage3 | 3 |
| La2;lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage2.2 | 4 |
| lineage4.8 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.6 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| La3;lineage4 | 1 |
| lineage4.4.2 | 1 |
| 2 | |
| La1.7;lineage4.9;lineage6 | 1 |
| La1;lineage4.9 | 3 |
| lineage4.1.1.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.3.4 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| lineage4.1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 298 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1159378 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR349265 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR3675582 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816100 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | SRR5341453 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR3675222 | Other | La1.7 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341425 | Other | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR349300 | Other | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4817998 | Other | lineage3 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675265 | Other | lineage4 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR7535082 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR11268038 | Other | La1.6 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675246 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR349266 | Other | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR28351347 | Other | lineage3 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR212001 | HR-TB | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363449 | Other | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR926165 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR5341387 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR9634265 | Sensitive | lineage4.3.4.2 | None | ERR4816478 | HR-TB | lineage4 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR363490 | Other | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR971389 | Other | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4814683 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | ERR1063896 | HR-TB | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None |
|---|
