Rv3596c - c.1053G>C


Drug resistance types
74 Sensitive 4 RR-TB 54 HR-TB 8 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 78 Other
lineage Counts
lineage Count
lineage4.9 134
lineage4.3.4.2 1
lineage4.3.3 2
La3;M.canetti;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7;lineage4.9 3
lineage4.8 2
lineage6.1.3 2
La3;lineage4.9 8
lineage4.1.2.1 5
La1.7.1;lineage4.9 1
lineage4.9;lineage7 1
lineage4.3.4.1 2
lineage2.2 4
lineage2.2.1.1 2
lineage3 4
lineage4.8;lineage4.9 2
lineage4.4.1.1.1 1
lineage2.2.1 14
lineage4.6.2.2 2
lineage4.5 1
lineage2.2.1.2 2
1
La1.7.1 1
lineage4.1.2 1
lineage4.6.3;lineage4.9 1
La1.3 1
lineage4.3.2.1 2
lineage1.1.2 3
lineage5.1.2 1
lineage3.1.2.1 1
La1.2.BCG 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
La3;lineage4 1
lineage4 1
La1.8.1 3
lineage1;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
lineage4.4.2 1
lineage4.3.4.2.1 1
lineage3.1 1
La1;lineage4.9 1
lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 223
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5535933 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR4188247 HR-TB lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046046 Other lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR14782054 Other lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR5341366 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
ERR4799378 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR5341308 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR5341467 Other lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR176778 HR-TB lineage4.9 None
ERR9786076 Sensitive lineage3 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6046385 Sensitive lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR926157 Sensitive lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR9786597 Other lineage4.6.2.2 None
ERR752229 Other lineage4.5 None
ERR3797029 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4821143 Other lineage4.9 None
ERR1063896 Sensitive None
ERR9787336 RR-TB lineage6.1.3 None
ERR369151 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046210 Other lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4769552 Sensitive La1.3 None
ERR971389 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR4797193 HR-TB lineage1.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR4769452 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR4799513 HR-TB lineage2.2 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR369157 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR5341387 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR926155 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4769444 HR-TB lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR363453 Sensitive lineage4.9 None
ERR4817998 Other lineage3 None
ERR3283028 Other La3;lineage4 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
SRR5341455 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR3797048 Other La3;lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR9896144 Other lineage3 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR5341425 Other lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR926158 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR323037 Other lineage4.9 None
ERR212138 HR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR3797073 Other La1.8.1 None
ERR926154 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR28351442 HR-TB lineage3.1 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR323085 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR7236177 Other La1.8.1 None
ERR137286 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
SRR6046611 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None