lineage | Count |
---|---|
La1.8.1 | 1 |
lineage4.9 | 27 |
lineage2.2.1.2 | 2 |
lineage4.1.2.1 | 4 |
lineage2.2 | 3 |
lineage4.3.4.2.1 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage2;lineage4 | 1 |
La1;lineage4.9 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1;lineage4.9 | 2 |
lineage4.9;lineage6.1.3 | 1 |
1 | |
lineage2.2.1 | 5 |
lineage2.2;lineage4.9 | 1 |
lineage4.4.2 | 1 |
lineage4.4.1.2 | 1 |
lineage4.9;lineage7 | 1 |
lineage4.9.1 | 1 |
lineage3 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 61 |
ID | Drug resistance | Lineage | Country iso2 | ERR5311077 | Other | La1.8.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4796577 | HR-TB | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR22048339 | Sensitive | lineage4.1.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4769493 | Other | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR037504 | Other | lineage4.9.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
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