Rv3596c - c.1434G>A


Drug resistance types
27 Sensitive 0 RR-TB 14 HR-TB 7 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 42 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.9 44
lineage4.1.2.1 2
lineage2.2.1 7
lineage4 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage4.9 2
La1.7;lineage4.9;lineage6 1
lineage4.5 1
lineage4.8 1
La1.7;M.canetti;lineage4.9 2
La3;lineage4.3.4 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage6.1.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 3
lineage1.1.1;lineage4 1
lineage2.2 2
M.canetti;lineage2.2 2
lineage4.1.1.3;lineage4.9 1
lineage1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2.1.2 2
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.4.1.1 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
1
lineage5.1.4 1
lineage3 1
lineage3.1.2.1;lineage4 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.9 1
lineage4.4.2 1
spoligotype Counts
spoligotype Count
None 94
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR369157 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR181744 HR-TB La3;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3283040 HR-TB lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
ERR400320 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR6045053 Other lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR14782054 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR161037 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR1023236 Other lineage6.1.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR20970016 Other lineage2.2 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1175127 Other lineage2.2.1.2 None
ERR369151 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046046 Other lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
ERR3283030 HR-TB lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR5341330 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR5341323 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR12708416 Sensitive None
ERR2513283 Sensitive lineage5.1.4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR10808730 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR28119827 Other La3;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
SRR5341373 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3675580 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045399 Other M.canetti;lineage4.9 None
DRR188519 Other lineage4.4.2 None
SRR3675541 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4769452 Other lineage4.9 None