Rv3457c - c.633T>C
Drug resistance types
75 Sensitive
20 RR-TB
64 HR-TB
32 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
131 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3;lineage4.9 | 1 |
| lineage4.1.2.1 | 8 |
| lineage4.9 | 159 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 4 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 17 |
| lineage4.8 | 6 |
| La1.7;lineage4.9 | 9 |
| lineage3 | 5 |
| M.canetti;lineage4.9 | 5 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage7 | 4 |
| La1.2 | 2 |
| La1.8.1 | 1 |
| lineage4.3.4.2 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage1.1.1 | 2 |
| lineage4.9;lineage9 | 3 |
| La1.2;La1.8.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| La3;lineage4.9 | 8 |
| lineage2.2 | 4 |
| lineage2.2.1.2;lineage7 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1;lineage4.9 | 3 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4 | 8 |
| lineage2.1;lineage4.9 | 2 |
| lineage6.1.2 | 1 |
| lineage4.1;lineage4.9 | 2 |
| La3;lineage4 | 1 |
| 2 | |
| lineage3.1;lineage9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 2 |
| lineage2.2.1.2 | 2 |
| lineage6.1.1 | 2 |
| lineage4.9.1 | 1 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.2.1 | 2 |
| La2;lineage4.9 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La1.7 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.2 | 1 |
| La2;lineage2.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage6.1.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 325 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR6045795 | Other | lineage2.2.1 | None | ERR349300 | Other | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR5341330 | Other | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR4769427 | Other | La1.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6045217 | Other | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR6045555 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR373946 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR349264 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR349266 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR369159 | Other | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR363446 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR12708416 | Sensitive | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR373945 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR13423649 | Other | lineage2.2.1 | None | SRR6046492 | Other | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4816151 | Other | lineage4.8 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4799025 | Other | lineage4.8 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR14782054 | Other | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR6045371 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | SRR6044875 | Other | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR473332 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR10808730 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR363500 | Other | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR6046485 | Other | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR11252736 | Other | lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR987722 | MDR-TB | None | SRR28351339 | MDR-TB | lineage4 | None | SRR30182471 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4769421 | Other | La1.2 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675265 | Other | lineage4 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR369163 | Other | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045548 | Other | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR4769457 | Other | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR4811031 | Other | lineage4.5 | None | ERR4811030 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR7821126 | Other | lineage1.1.3.2 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR363453 | Other | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR3675222 | Other | La1.7 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR3675260 | Sensitive | lineage4.9 | None |
|---|
