SRR1173363
|
Other
|
|
None
|
SRR1175474
|
Other
|
lineage4.9
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR21240029
|
Sensitive
|
lineage4.3.3
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2660495
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6855695
|
Sensitive
|
lineage4.8
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR190388
|
Sensitive
|
lineage4.9
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1175472
|
RR-TB
|
lineage4.3.4.1
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
ERR036242
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR6982099
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR181708
|
RR-TB
|
lineage1.1.2;lineage4
|
None
|
ERR1082121
|
Sensitive
|
lineage4.9;lineage5.1.1
|
None
|
ERR161047
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR21737226
|
Sensitive
|
lineage4.5
|
None
|
SRR1792247
|
Other
|
La1.7.1
|
None
|
SRR6785267
|
Other
|
lineage2.2.1
|
None
|
ERR6052085
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
SRR6982349
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1173788
|
Sensitive
|
lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR736805
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1175074
|
Other
|
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
ERR1023250
|
Sensitive
|
lineage6.1.1
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
ERR4188021
|
Other
|
La1.8.1
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
ERR4872077
|
Pre-XDR-TB
|
lineage5.2
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR736818
|
Sensitive
|
lineage4.3.3
|
None
|
SRR1172844
|
Sensitive
|
lineage4.9
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR181940
|
Sensitive
|
lineage3.1.1
|
None
|
SRR5341455
|
Sensitive
|
lineage4.9
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6045957
|
Other
|
lineage4.9
|
None
|
ERR161014
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR7240476
|
Other
|
La1.8.1
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR323036
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341332
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
ERR216901
|
Other
|
lineage3.1.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
ERR1873463
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR3725591
|
Sensitive
|
lineage4.9
|
None
|
SRR6045480
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR13245558
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
SRR3725590
|
Sensitive
|
lineage4.9
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
SRR4033203
|
Sensitive
|
lineage4.9
|
None
|
SRR15368973
|
Other
|
lineage4.9
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
ERR5087596
|
Other
|
La1.8.1
|
None
|
SRR1208334
|
Other
|
lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
ERR4821655
|
HR-TB
|
lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR6046783
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR9786558
|
Other
|
lineage4.3.4.2
|
None
|
ERR4769549
|
Sensitive
|
lineage4.9
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
SRR3675548
|
Sensitive
|
lineage4.9
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR216910
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02350437
|
MDR-TB
|
lineage4.8
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
ERR9786515
|
Other
|
lineage4.1.2.1
|
None
|
ERR1873446
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
SRR25827452
|
MDR-TB
|
lineage1.1.2;lineage2.2.1;lineage4.2.2.2
|
None
|
ERR4817915
|
Other
|
lineage4.9
|
None
|
SRR124452
|
Sensitive
|
lineage2.2.2;lineage4.9
|
None
|
SRR18003030
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
SRR6257046
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6982213
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR9786597
|
Other
|
lineage4.6.2.2
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
SRR7240147
|
Other
|
La1.8.1
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
SRR1173562
|
Sensitive
|
lineage4.9
|
None
|
SRR11972390
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR216949
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
ERR4831841
|
HR-TB
|
lineage2.2.1;lineage4.4.2
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR163988
|
Sensitive
|
lineage4.1.2
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR12882669
|
Sensitive
|
lineage3.1.1
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2515230
|
Sensitive
|
lineage4.8
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR6046839
|
Other
|
lineage4.9
|
None
|
SRR17832798
|
Sensitive
|
lineage3
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1181085
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR1208759
|
Sensitive
|
lineage4.9
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
SRR1172717
|
Sensitive
|
lineage4.9
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
DRR184982
|
Other
|
lineage2.2.1
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR9613550
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR3675210
|
Sensitive
|
lineage4.9
|
None
|
SRR3675292
|
Sensitive
|
lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
ERR4769408
|
Other
|
La1.3
|
None
|
ERR161125
|
Sensitive
|
lineage4
|
None
|
ERR1023302
|
MDR-TB
|
La3;lineage3
|
None
|
SRR6797751
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR176450
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR11466242
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR12708371
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
ERR987719
|
HR-TB
|
lineage3
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR176475
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR718268
|
Sensitive
|
lineage1.1.1
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
ERR2179850
|
Sensitive
|
lineage4
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR4769433
|
RR-TB
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR7236390
|
Other
|
La1.8.1
|
None
|
ERR970449
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR161184
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4769503
|
Other
|
La1.2
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR4818252
|
Sensitive
|
lineage4.1.1.2
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
ERR323068
|
Sensitive
|
lineage4.9
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786258
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR867572
|
Other
|
lineage4.9
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
ERR133816
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR2179737
|
HR-TB
|
lineage4.2.1
|
None
|
SRR3725599
|
Sensitive
|
lineage4.9
|
None
|
ERR2693238
|
Sensitive
|
lineage4.9
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
SRR10808490
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR3725594
|
Sensitive
|
lineage4.9
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR4187819
|
Sensitive
|
La1.8.1;lineage4
|
None
|
ERR4188035
|
Other
|
La1.8.1
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR2660498
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
ERR1873461
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR216953
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
SRR3743401
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR4814690
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1173568
|
Sensitive
|
lineage4.9
|
None
|
ERR2653138
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR245795
|
Sensitive
|
lineage3.1.1;lineage4.3.2.1
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR1165306
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR5074094
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR1792232
|
Other
|
La1.7.1
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR1082134
|
Sensitive
|
lineage5.1.1
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR11294512
|
Other
|
La1.8.1
|
None
|
SRR11871419
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR9971319
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
SRR29772570
|
Other
|
lineage4.9
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR161173
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR1180237
|
Sensitive
|
lineage4.1.2
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SAMN02585942
|
Sensitive
|
lineage4.1.2
|
None
|
ERR6052110
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
ERR1873476
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR1034638
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9786498
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28119741
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
SRR1196677
|
Other
|
lineage2.2
|
None
|
ERR4769427
|
Other
|
La1.2
|
None
|
ERR4872322
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2513259
|
Other
|
lineage3
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1173218
|
Other
|
lineage4.3.3
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1173484
|
Sensitive
|
lineage4.9
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
ERR4769506
|
Sensitive
|
lineage4.9
|
None
|
SRR1011480
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
ERR9786447
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR5341430
|
Other
|
lineage3
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR12199461
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR3725585
|
Sensitive
|
lineage4.9
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
SRR7535044
|
Pre-XDR-TB
|
lineage4.6.1.2
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
SRR6789626
|
Other
|
|
None
|
SRR3725595
|
Sensitive
|
lineage4.9
|
None
|
ERR4769457
|
Other
|
lineage4.9
|
None
|
ERR4769518
|
Sensitive
|
lineage4.9
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR190339
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR10808399
|
Sensitive
|
lineage4.9
|
None
|
SRR13199739
|
Other
|
La1.7.1
|
None
|
SRR11342689
|
Other
|
lineage4.1.2.1
|
None
|
SRR10851629
|
Sensitive
|
lineage4.3.3
|
None
|
ERR760877
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
ERR2660441
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR867540
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR3675318
|
Other
|
lineage4.9
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
SRR10993957
|
Other
|
La1.6
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
ERR323061
|
Sensitive
|
lineage4.9
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
ERR2307789
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR3797074
|
Sensitive
|
lineage4.9
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
DRR184913
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR5758436
|
Other
|
lineage2.2.2
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
DRR099689
|
Sensitive
|
lineage1.1.1.1
|
None
|
ERR751729
|
Other
|
lineage1.1.1
|
None
|
ERR1873549
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR1238557
|
Other
|
lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1181368
|
Other
|
lineage4.9
|
None
|
SRR1182994
|
Sensitive
|
lineage4.1.2
|
None
|
ERR2514692
|
Other
|
|
None
|
ERR245716
|
Sensitive
|
lineage2.2.1
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
SRR1173153
|
Other
|
lineage4.9
|
None
|
SRR9971046
|
MDR-TB
|
lineage4.8
|
None
|
ERR736822
|
Sensitive
|
lineage4.4.1.2
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
SRR5431730
|
Other
|
La1.8.1
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR1140724
|
Other
|
lineage2.2.1
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR21713567
|
Sensitive
|
lineage4.5
|
None
|
SRR6785227
|
Other
|
lineage2.2.1
|
None
|
SRR9971270
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR2660499
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
SRR10869074
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR4769552
|
Sensitive
|
La1.3
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
ERR4769479
|
Other
|
La1.3
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR4816100
|
Sensitive
|
lineage1.1.2;lineage4.1.2.1;lineage4.1.3
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
SRR3725597
|
Sensitive
|
lineage4.9
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR1181242
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR4033549
|
Other
|
lineage2.2.2
|
None
|
SRR10869302
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR29603691
|
Sensitive
|
lineage3
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR1184329
|
Other
|
lineage4.9
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR4034393
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR4188372
|
Sensitive
|
La1.8.1;lineage4.9
|
None
|
ERR4769470
|
Sensitive
|
lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
SRR1173777
|
Sensitive
|
lineage4.9
|
None
|
ERR2179695
|
Sensitive
|
lineage4.5
|
None
|
ERR245809
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR11972188
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR502517
|
Other
|
lineage5.1.1
|
None
|
SRR12199468
|
Sensitive
|
lineage4.9
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR1173185
|
Other
|
lineage4.9
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
SRR1011488
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR6045887
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR6982053
|
Sensitive
|
lineage4.3.4.1;lineage4.9
|
None
|
SRR124451
|
Sensitive
|
lineage2.2.2
|
None
|
ERR1873437
|
HR-TB
|
lineage2.2.2
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
SRR1792392
|
Other
|
La1.8.1
|
None
|
ERR473303
|
Sensitive
|
lineage4.9
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR1034647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1792011
|
Other
|
La1.8.1
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
SRR2100532
|
Sensitive
|
lineage3
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR3324368
|
RR-TB
|
lineage1.1.2;lineage6.2.3
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
ERR161201
|
Sensitive
|
lineage1.1.3.2
|
None
|
ERR1679639
|
Other
|
lineage4.6.4
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
SRR11972274
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR1062859
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1173118
|
Other
|
lineage2.2.1
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR3804154
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR1173213
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1175491
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR6785301
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21690574
|
Other
|
lineage4.1.2.1
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR228175
|
Sensitive
|
lineage3
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3283009
|
Other
|
La1.8.1
|
None
|
ERR4769550
|
Sensitive
|
La1;lineage4.9
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
ERR216930
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR26159053
|
Sensitive
|
lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6785263
|
Sensitive
|
lineage2.2.1
|
None
|
ERR161170
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR176781
|
Sensitive
|
lineage1.1.3.2
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR3725593
|
Sensitive
|
lineage4.9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
ERR037501
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4829530
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR6046376
|
Other
|
lineage3
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR1062920
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
SRR14802079
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
SRR25827605
|
Pre-XDR-TB
|
lineage2.2.1;lineage3;lineage4
|
None
|
SRR124453
|
HR-TB
|
lineage2.2.2
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
SRR10869017
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR9787362
|
Sensitive
|
lineage6
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR3797024
|
Sensitive
|
lineage4.9
|
None
|
ERR108424
|
Sensitive
|
lineage4.8
|
None
|
ERR9117709
|
Other
|
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
ERR4769516
|
Sensitive
|
lineage4.9
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
SRR9971065
|
RR-TB
|
lineage2.2.1
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6982088
|
Other
|
lineage4.1.1.2
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
SRR28351442
|
HR-TB
|
lineage3.1
|
None
|
SRR3725588
|
Sensitive
|
lineage4.9
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
ERR752012
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR3324325
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR6153231
|
Sensitive
|
lineage4.4.1.2
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407452
|
Other
|
lineage3
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
ERR400538
|
RR-TB
|
lineage5.1.2
|
None
|
SRR8758877
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR10993953
|
Other
|
La1.6
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
SRR1792022
|
Other
|
La1.8.1
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR3725596
|
Sensitive
|
lineage4.9
|
None
|
SRR5341298
|
Sensitive
|
lineage4.9
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
SRR3725589
|
Sensitive
|
lineage4.9
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR502480
|
Other
|
lineage5.1.1
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
SRR6824603
|
Sensitive
|
lineage4.4.2
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
SRR10482948
|
Other
|
La1.8.1
|
None
|
ERR4188202
|
Other
|
La1.8.1
|
None
|
ERR4769462
|
Other
|
La1.3
|
None
|
ERR4769514
|
Other
|
La1.3
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
ERR4769555
|
Sensitive
|
La1.3
|
None
|
SRR14801294
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR12420396
|
Sensitive
|
lineage2.2.1
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
SRR28044634
|
Other
|
lineage3
|
None
|
ERR216950
|
Sensitive
|
lineage1.1.3.2
|
None
|
ERR9787197
|
Other
|
|
None
|
ERR234659
|
Other
|
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
ERR9119483
|
Pre-XDR-TB
|
lineage5.2
|
None
|
SAMN02350446
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1062851
|
MDR-TB
|
lineage4.8
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
SRR17406750
|
Other
|
lineage1.1.2
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1063882
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR212100
|
Sensitive
|
lineage1.2.2.1;lineage4
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR6044925
|
Sensitive
|
lineage4.9
|
None
|
SRR15508556
|
Other
|
lineage4.3.4.1
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
ERR1873561
|
XDR-TB
|
lineage2.2.2
|
None
|
SRR12420276
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|