Rv3457c - c.117T>G
Drug resistance types
80 Sensitive
7 RR-TB
47 HR-TB
17 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
84 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| lineage4.9 | 116 |
| lineage4 | 4 |
| La1.7;lineage4.9 | 2 |
| La2;lineage4.9 | 2 |
| lineage4.1.2.1 | 5 |
| lineage4.9;lineage7 | 4 |
| La1.2;La1.8.1 | 1 |
| lineage2.2.1 | 12 |
| lineage3.1.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| 4 | |
| lineage1.1.1;lineage4 | 1 |
| lineage5.2 | 2 |
| lineage4.2;lineage4.9 | 3 |
| lineage3 | 3 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage1;lineage4.9 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.5 | 1 |
| lineage2.2 | 3 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage2.2 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage4.8 | 2 |
| lineage4.9;lineage9 | 2 |
| La3;lineage4.9 | 4 |
| La1;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1.2 | 2 |
| lineage6.1.3 | 1 |
| lineage6.1.1 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.6.2.2 | 3 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 2 |
| La1.7.1 | 1 |
| La1.8.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.2.BCG | 1 |
| lineage1.1.1 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 239 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR3675248 | Other | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR29096150 | Other | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR176751 | Other | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4769452 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR349266 | Sensitive | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR12708416 | Sensitive | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR29231548 | MDR-TB | lineage5.2 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR6046878 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675270 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR6045526 | Other | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR2446566 | Other | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR373947 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR2706950 | MDR-TB | lineage5.2 | cd | ERR369159 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR17832802 | HR-TB | lineage3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | ERR3797029 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR3275450 | Other | lineage4 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | SRR5535933 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675284 | Sensitive | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR5341330 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR363447 | Other | lineage4.9 | None | SRR26331611 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR29097066 | Sensitive | lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR2514692 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR13266555 | Pre-XDR-TB | lineage2.2.1 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR5341373 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR387051 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
|---|
