lineage | Count |
---|---|
lineage4.6.2.2 | 1 |
lineage4.9 | 93 |
lineage3 | 2 |
lineage4.3.4 | 1 |
1 | |
lineage4.1.2 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
La1.8.1 | 2 |
lineage2.2 | 3 |
lineage4.3.4.2.1 | 1 |
lineage2.2.1 | 9 |
La1.7.1;La1.7.X-unk4 | 1 |
La1;lineage4.9 | 3 |
La1.7.1;lineage4.9 | 1 |
lineage4.2.1 | 1 |
lineage1.1.3.1 | 1 |
lineage1.1.2 | 1 |
lineage4.9;lineage7 | 1 |
lineage4.1.2.1 | 1 |
lineage4.8;lineage4.9 | 2 |
lineage4 | 3 |
lineage2.2.1.2;lineage7 | 1 |
La1.7;lineage4.9;lineage6 | 1 |
lineage2.2.1.2 | 2 |
lineage4.3.3 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage6.1.3 | 1 |
lineage1;lineage4.9 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage4.8 | 1 |
lineage1.2.1.1 | 1 |
La1;lineage2;lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
La1;lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 145 |
ID | Drug resistance | Lineage | Country iso2 | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063896 | Sensitive | None | SRR1159378 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR29096935 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR6866639 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4769452 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798099 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR181887 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR29096527 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR29096873 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341387 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR29096882 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6045053 | Other | lineage4 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR6046593 | Other | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR26331611 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR29096225 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None |
---|