lineage | Count |
---|---|
lineage4.9 | 13 |
lineage2.2.1 | 11 |
lineage9;lineage3.1 | 1 |
lineage4 | 16 |
28 | |
lineage4.3.4 | 1 |
lineage5.1.4 | 1 |
lineage4.2.1.1 | 1 |
lineage4.9.1 | 1 |
lineage4.7 | 1 |
lineage4.6.1.1 | 2 |
lineage4.1.2.1 | 2 |
lineage1.2.2.2 | 1 |
La1 | 1 |
lineage3.1.2.1 | 1 |
lineage4.5 | 1 |
lineage4.8 | 1 |
lineage4.6.2.2 | 1 |
lineage2.2.1.2 | 2 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 87 |
ID | Drug resistance | Lineage | Country iso2 | SRR19295647 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675550 | Other | None | SRR3675247 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | SRR3675510 | Other | None | SRR3675522 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR212123 | Other | None | ERR212034 | HR-TB | None | ERR4816466 | HR-TB | None | ERR1035162 | Other | None | SRR6046210 | Other | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341418 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR7496471 | Sensitive | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR502889 | Other | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4797313 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR4798406 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6359045 | HR-TB | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None |
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