Rv0668 - c.-228C>G
Drug resistance types
46 Sensitive
6 RR-TB
89 HR-TB
24 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
127 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 7 |
| lineage4.9 | 176 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage4.3.4.2.1 | 6 |
| La1.7;lineage4.9 | 9 |
| La1;lineage4.9 | 3 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.1 | 8 |
| La2;lineage2.2 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage4.9 | 7 |
| lineage4.8 | 2 |
| lineage4.3.3 | 3 |
| lineage4.9;lineage9 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.2.1 | 5 |
| lineage2.2 | 4 |
| La1.8.1 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage1.1.2 | 2 |
| La2;lineage4.9 | 2 |
| lineage4.9.1 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.3.2.1 | 5 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4 | 5 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.3.4 | 1 |
| lineage4.8.1 | 1 |
| lineage4.6.5 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.7 | 2 |
| La3;lineage4 | 1 |
| 1 | |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.2 | 1 |
| lineage6.1.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.4.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 1 |
| lineage2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.6.2.2 | 1 |
| La1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 298 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR363479 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR349300 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9786076 | Other | lineage3 | None | SRR5535933 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4817204 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6045548 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR16156817 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR751326 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | ERR323037 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR11465833 | Sensitive | lineage4.3.2.1 | None | SRR1158918 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR369159 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4817998 | Other | lineage3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180440 | Other | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR3675222 | Other | La1.7 | None | ERR363447 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063896 | HR-TB | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR6046878 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR1173740 | Other | lineage3;lineage4 | None | SRR6046210 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR473332 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR16278274 | Other | La1.4 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR6046253 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None |
|---|
