Rv1305 - c.120C>T
Drug resistance types
25 Sensitive
0 RR-TB
16 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 28 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1.2 | 1 |
| La1.7;lineage4.9 | 5 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage1.1.1;lineage4 | 1 |
| lineage2.2 | 2 |
| lineage2.2.1 | 7 |
| lineage1;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| 1 | |
| lineage5.1.4 | 1 |
| lineage4.5 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR11049895 | Sensitive | lineage4.1.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR20970016 | Other | lineage2.2 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR11049810 | Sensitive | lineage4.1.2.1 | None | SRR5535933 | Other | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR26331611 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR176651 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR3675522 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12708416 | Sensitive | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR11068823 | Sensitive | lineage4.1.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR400345 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
|---|
