Rv0667 - c.2406G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
16 Sensitive
8 RR-TB
19 HR-TB
21 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 44 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage4.3.3 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3.1.1 | 1 |
| lineage5.2 | 2 |
| lineage3 | 2 |
| lineage2.2.1 | 14 |
| lineage3;lineage4 | 2 |
| La1.7;lineage4.9 | 5 |
| lineage2;lineage4 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.8.1 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1.2 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.8 | 3 |
| lineage4.1.2.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2 | 1 |
| lineage4 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.8.1 | 2 |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| La1.7 | 2 |
| lineage2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 123 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR1173515 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR6046376 | Other | lineage3 | None | SRR12420587 | MDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR3675270 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR4819305 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1196545 | Sensitive | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR15315797 | RR-TB | lineage2.2.1;lineage4 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR6044835 | Other | lineage4.9 | None | SRR29050928 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4821143 | Other | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6044780 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR5431730 | Other | La1.8.1 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR7240538 | Other | La1.7.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR1034791 | RR-TB | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None |
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