Rv0682 - c.39G>C


Drug resistance types
73 Sensitive 3 RR-TB 72 HR-TB 14 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 62 Other
lineage Counts
lineage Count
lineage4.9 122
La1;lineage4.9 2
lineage1.1.3.1 1
lineage4.4.1.2 1
lineage4.3.4.1 1
lineage2.2.1;lineage4.9 2
lineage2.2 2
lineage5.2 2
5
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La1.8.1 1
lineage4.9;lineage6.1.3 1
lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La3;lineage2.1;lineage4.9 1
La1.7;lineage4.9;lineage7 3
La1.7;lineage4.9 3
lineage4.8.1 1
lineage4.8 1
lineage4.9;lineage9 2
La3;lineage4.9 12
lineage4.6.2.2 3
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4 4
lineage3 3
lineage2.2.1 6
lineage2.2.1.2 1
lineage4.9;lineage7 3
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.2.1.1 2
lineage4.8;lineage4.9 2
lineage4.1;lineage4.8 1
M.canetti;lineage2.2 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.4.1.1.1 1
La3;lineage4 1
lineage4.3.4.2.1 2
La1.7.X-unk4;lineage4.9 1
lineage4.1.2 1
lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage4.3.2.1 1
La2;lineage4.9;lineage9 1
La1;lineage4.1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.3.1;lineage4.9;lineage6 1
La2;lineage4.9 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
lineage4.2.1 1
spoligotype Counts
spoligotype Count
None 229
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR971389 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR5341308 Sensitive lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR1183111 HR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786843 Other None
ERR212001 HR-TB None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046878 Other lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR926155 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3283040 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR387051 Other lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR6046133 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR161037 Other lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR926159 Sensitive lineage4.9 None
ERR990545 Other lineage3 None
ERR4816478 HR-TB lineage4 None
ERR926154 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR4769452 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR234659 Other None
ERR4818536 Other lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4797474 Sensitive lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1180312 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180410 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535082 Sensitive lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR323066 Sensitive lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR3283028 Other La3;lineage4 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR1063896 Sensitive None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR20969731 Other lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4769474 HR-TB lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR926163 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR5341453 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR176751 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4796929 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR987722 MDR-TB None
ERR4769442 Sensitive lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR369151 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR502511 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR323039 HR-TB La2;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR5341300 HR-TB lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR5341461 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4819877 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4817731 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None