EBG00000313339 - n.2872A>T
Drug resistance types
15 Sensitive
17 RR-TB
20 HR-TB
5 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.9 | 30 |
| lineage2.2.1 | 10 |
| La1.8.1 | 3 |
| lineage2.2.2 | 2 |
| lineage4.8 | 17 |
| lineage2.2 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.6.5 | 2 |
| lineage1.1.1 | 1 |
| lineage4 | 2 |
| lineage4.1.2.1 | 3 |
| lineage3.1.1 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage3 | 3 |
| lineage2.2.1.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.4.2 | 1 |
| La1;lineage4.9 | 1 |
| La1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage6.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR1791725 | Other | La1.8.1 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR11662690 | HR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR20970016 | Other | lineage2.2 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | ERR752229 | Other | lineage4.5 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR5341330 | Other | lineage4.9 | None | DRR184903 | Sensitive | lineage2.2.2 | None | SRR11462861 | Other | La1.8.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR1173385 | Sensitive | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7240476 | Other | La1.8.1 | None | SRR6045347 | Other | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR6046593 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4821054 | Sensitive | lineage3 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4769450 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR3675270 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR10796559 | Other | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR6046253 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR6045053 | Other | lineage4 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR3743401 | MDR-TB | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR4769427 | Other | La1.2 | None | SRR6046492 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR6045548 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR7240538 | Other | La1.7.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR14782054 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
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