Rv0676c - p.Ala848Ser

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
5 Sensitive 3 RR-TB 42 HR-TB 2 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 28 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.2.1 3
lineage2.1 1
M.canetti;lineage2.1;lineage4.9 7
lineage4.1.1;lineage4.9 1
lineage4.9 17
lineage4.1.1.1 1
lineage2.1;lineage4.9 6
La3;M.canetti;lineage2.1;lineage4.9 5
lineage4.4.1.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1;lineage4.9;lineage6.3 2
La1.7 1
7
lineage4.2;lineage4.8.1;lineage4.9 1
lineage2.2.1.2 2
La1.8.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage4.2;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
La1.7;lineage4.9 1
lineage3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage2.2.1.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.3.4 1
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage4.9 1
spoligotype Counts
spoligotype Count
None 80
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR20970016 Other lineage2.2.1 None
SRR20969677 HR-TB lineage2.1 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29055611 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6789626 Other None
ERR4811142 RR-TB None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2 None
SRR20969708 HR-TB lineage2.2.1 None
SRR8217918 HR-TB lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR7240033 Other La1.8.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29097054 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1184381 MDR-TB None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR18213713 HR-TB None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9119669 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR29097004 Other lineage3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR6046485 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR4811105 HR-TB None
ERR4810741 HR-TB None
ERR4811311 Other None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None