Rv0668 - c.-312C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
36 Sensitive
16 RR-TB
22 HR-TB
9 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 3 |
| lineage4.5 | 1 |
| lineage4.8 | 3 |
| lineage4.9 | 51 |
| lineage4.6.1.1 | 3 |
| lineage4.3.4.1 | 3 |
| lineage4.9;lineage7 | 4 |
| lineage4.3.4.2.1 | 5 |
| lineage3 | 5 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1.2 | 3 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1 | 12 |
| lineage4.1.2.1 | 3 |
| lineage4.1.1.3 | 2 |
| La1.6 | 1 |
| lineage4.3.3 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage4.3.3;lineage4.8 | 2 |
| La1.7.1 | 2 |
| La1.8.1 | 2 |
| lineage6.1.3 | 1 |
| lineage2.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| 1 | |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 126 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR5341330 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR4821276 | Sensitive | lineage3 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR4821747 | Sensitive | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1049672 | Other | lineage3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469200 | Other | La1.7.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR7240033 | Other | La1.8.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1791725 | Other | La1.8.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4796577 | HR-TB | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR6044780 | Sensitive | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR176741 | Other | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None |
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