Rv3596c - c.427_428delTCinsAG


Drug resistance types
15 Sensitive 13 RR-TB 98 HR-TB 23 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 154 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 3
lineage2.2.1 10
lineage2.1;lineage4.9;lineage6.3 6
M.canetti;lineage2.1;lineage4.9 2
lineage4.9 107
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;lineage4.9 3
lineage2.1 3
lineage2.1;lineage4.9 13
La1.7;lineage4.9;lineage7 3
La1;lineage2;lineage4.9 1
lineage4.9;lineage6.3 4
M.canetti;lineage4.9 5
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;lineage4.9 3
lineage4.4.1.1 2
La1.7;M.canetti;lineage4.9 4
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.2.1 11
lineage4.1;lineage4.8 2
lineage4.9;lineage7 2
La3 2
lineage4.8 3
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1;lineage4.9 2
lineage4.1.3 2
lineage4.2;lineage4.6.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.9;lineage9 1
lineage3 7
lineage4.3.4.1 2
lineage4.6.2.2 6
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2 4
lineage1.1.3.1 1
21
La3;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La2;lineage2.2 1
lineage4.7 2
lineage2.1;lineage6.3 2
La1.7.1 1
lineage4.1.2 1
La1.6;La3;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage1.1.1.1 1
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage3 1
lineage4.9;lineage6.1.3 1
lineage1.1.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.2.1 1
lineage4.1.1.1 2
lineage2.2.1.2 2
La1;lineage4.1.2 1
lineage4.3.4.2 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.2.BCG 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage2.2.1.1 1
La1.8.1 1
La2;lineage4.9 1
lineage4.6.1.1 1
lineage4 2
M.canetti;lineage1 1
lineage5.2 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1 1
lineage1.2.2.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.4.1.2 1
lineage6.1.3 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage4.9;lineage9 1
La1.7;lineage4.9;lineage6 1
La3;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 310
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR13423649 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR3797015 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
ERR751326 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR3797070 Other lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR1172728 RR-TB La3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675246 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9786694 Other lineage4.1.2.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180137 RR-TB lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4797588 MDR-TB lineage3 None
SRR12416840 MDR-TB lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
ERR502510 HR-TB lineage4.9 None
SRR3675311 Other lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR6359082 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR20970016 Other lineage2.2 None
ERR369159 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR1184381 MDR-TB None
ERR4818615 Sensitive None
SRR6789626 Other None
ERR234659 HR-TB None
SRR7535086 Other None
ERR9787197 Other None
ERR4816999 Other None
SRR1196583 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4798099 HR-TB lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
ERR4818929 HR-TB lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR926165 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
SRR7535082 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR26399491 Sensitive lineage1.1.1.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR1063883 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR5341310 Other lineage1.1.2 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3797085 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR176793 Other lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
ERR926164 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR3283040 HR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR7131023 Other lineage4.1.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
SRR7496509 Other None
ERR1063896 HR-TB None
ERR2514692 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
SRR7496517 Other None
SRR3675236 Other None
ERR3797029 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR373945 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1159378 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR9786592 Other lineage4.3.4.2 None
ERR3283055 HR-TB lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR6866639 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR9786627 Other lineage4.1.2.1 None
SRR14782054 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4769521 RR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6789621 Other lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6511621 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4815441 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR26399255 Sensitive lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR5341453 Other lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR363509 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786440 Other lineage4.1 None
ERR363453 Other lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR473332 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341425 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9787165 Other lineage6.1.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR9786601 Other lineage4.1.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR5341299 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496523 Other lineage4.7 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR5341456 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR971389 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR1175074 Other None
ERR9786604 Other None
ERR4815604 Other None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
SRR1184372 MDR-TB None
ERR4817060 Other None
SRR28044873 Pre-XDR-TB lineage3 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675441 RR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None