Rv0006 - c.189C>G
Drug resistance types
62 Sensitive
3 RR-TB
52 HR-TB
8 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1 | 1 |
| 61 | |
| lineage4.9 | 20 |
| lineage4.2.1 | 2 |
| lineage3 | 3 |
| lineage2.2.1 | 3 |
| lineage2.2 | 5 |
| lineage9;lineage3.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.9;La3 | 1 |
| lineage4 | 49 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.2.1 | 8 |
| lineage4.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8 | 3 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.8;La3 | 2 |
| lineage4.3.2.1 | 2 |
| lineage3.1.2 | 2 |
| lineage5.2 | 2 |
| lineage1.1.2 | 1 |
| La2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 187 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14782405 | HR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675292 | Sensitive | lineage4 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675234 | Other | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675503 | Sensitive | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR2027263 | Other | lineage4 | None | ERR4816151 | Other | lineage4.8 | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR212001 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3742665 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817998 | Other | lineage3 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR2513961 | HR-TB | lineage3.1.2 | None | ERR1035138 | MDR-TB | None | ERR2514692 | Other | None | SRR6045503 | HR-TB | None | SRR5341302 | HR-TB | None | ERR2693231 | Other | None | ERR2514821 | Other | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046397 | Other | None | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6789626 | Other | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831117 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR502524 | HR-TB | La2 | None | SRR8217918 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323107 | Other | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3283055 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR3797024 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797044 | Other | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4407463 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798431 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811142 | MDR-TB | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4811105 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4811493 | HR-TB | None | ERR736865 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR9634265 | Sensitive | None | ERR736874 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1169194 | Other | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR12142341 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None |
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