EBG00000313339 - n.1916G>A
Drug resistance types
89 Sensitive
0 RR-TB
54 HR-TB
15 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 5 |
| lineage3.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1 | 2 |
| 36 | |
| lineage4.2.2.2 | 1 |
| lineage4.9 | 44 |
| lineage4 | 57 |
| lineage3 | 7 |
| lineage5.1.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.4 | 1 |
| lineage2.2.1 | 15 |
| lineage1.1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.6.2.2 | 5 |
| lineage5.2 | 2 |
| lineage4.5;lineage2.2 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1.2 | 1 |
| lineage2 | 1 |
| lineage2.2 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage5 | 1 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 207 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2245402 | Sensitive | lineage3.1.1 | no | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR234659 | HR-TB | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2514924 | Sensitive | lineage3 | gb | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | ERR4820569 | Sensitive | lineage3 | gb | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR5341333 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | ERR2517475 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045233 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046299 | HR-TB | None | SRR6046046 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6046376 | Other | lineage3 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | SRR6257066 | MDR-TB | lineage4.3.3 | None | ERR4872096 | MDR-TB | lineage4.6.2.2 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | ERR4831840 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831638 | Sensitive | None | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | ERR502943 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR363426 | Sensitive | lineage4 | None | ERR3283055 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4800197 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4800341 | Other | lineage3 | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR5336170 | HR-TB | lineage5 | None | ERR702404 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119502 | MDR-TB | lineage4.6.2.2 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1002693 | MDR-TB | lineage4.3.3 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11972345 | MDR-TB | lineage2.2.1.1 | None | SRR14782405 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR19315451 | Sensitive | lineage4 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR21596000 | HR-TB | lineage1.2.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR21677858 | Sensitive | lineage4 | None | SRR3675455 | Sensitive | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | ERR3275450 | Other | lineage4 | None | SRR3675222 | Other | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None |
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