EBG00000313339 - n.1916G>A
Drug resistance types
34 Sensitive
1 RR-TB
31 HR-TB
12 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 81 |
| lineage4.4 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage2.2.1 | 11 |
| lineage4.1.1.3 | 2 |
| lineage2.1;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 3 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.3.4.1 | 2 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage2.2.1.2 | 2 |
| La1.7 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage3 | 3 |
| lineage4.5 | 2 |
| La1;lineage4.9 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.9.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 2 |
| lineage4.4.2 | 1 |
| 3 | |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage5.2 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR369157 | Sensitive | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR11466242 | Sensitive | lineage4.1.1.3 | None | SRR6045548 | Other | lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR3675318 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR3675222 | Other | La1.7 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR373947 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR752229 | Other | lineage4.5 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR363449 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR373946 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR349299 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR363453 | Other | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR6359082 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR363479 | Other | lineage4.9 | None | SRR19315451 | Other | lineage4 | None | ERR369159 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR363446 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR234659 | HR-TB | None | SRR25827682 | Other | None | ERR349300 | Other | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR373945 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR363421 | Other | lineage4.9 | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR25827605 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR349265 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR11465801 | Other | lineage4.3.4.1 | None | ERR4811030 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR363490 | Other | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR363500 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR6045503 | Other | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR12708416 | Sensitive | None |
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