Rv0668 - c.2943T>G


Drug resistance types
7 Sensitive 7 RR-TB 83 HR-TB 43 MDR-TB 5 Pre-XDR-TB 4 XDR-TB 141 Other
lineage Counts
lineage Count
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.9 47
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.2.1 11
18
M.canetti;lineage4.9 2
lineage2.1;lineage4.9 16
La1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 21
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage5.2 2
lineage3 2
lineage4 3
La3;lineage4.9 4
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1 3
lineage6.1.3 2
lineage3.1 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.1.2.1 9
lineage2.2 3
lineage4.6.3;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage4.8 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage3.1;lineage9 1
La3;M.canetti;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 10
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 10
La1.7;lineage4.9 4
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.2.1;lineage3 1
lineage2.2.2 1
lineage2.2.1;lineage6.3 1
lineage1.1.2 2
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage1.2.2.2 1
lineage4.1.3 2
M.canetti;lineage2.1;lineage6.3 2
lineage2.1;lineage6.3 2
La3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage4.8 1
La3;lineage2.2.1 2
La3;lineage2.1;lineage4.9 3
lineage2.2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.4.1.1 1
La1.7;M.canetti;lineage4.9 5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage4.3.4.2.1 4
M.canetti;lineage2.2 3
lineage4.9;lineage7 2
lineage1.2.1.2 1
La1.7.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.9;lineage6.3 7
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.2.1.2 2
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
La1.7 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.2.2 3
lineage4.1.1.1 3
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.2 1
lineage1.1 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
La3;lineage2 1
M.canetti;lineage2.1;lineage4 1
lineage4.1.1.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 290
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1196546 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675236 Other None
SRR6045399 Other M.canetti;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787153 Other lineage6.1.3 None
SRR1184346 HR-TB lineage3.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR7496472 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR28119752 Other lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
SRR29096541 Other lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR21733183 RR-TB lineage1.1.2 None
ERR4816999 Other None
SRR26159043 Other lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR7496509 Other None
ERR12015083 Other La3;lineage4.8 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4817847 Sensitive lineage4.8 gb
SRR13861332 Other lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR2514692 Other None
ERR212001 HR-TB None
ERR9787197 Other None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786671 Other None
ERR176549 Other lineage4.3.4.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR2514821 Sensitive lineage2.2.1 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR6045555 Other lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR4796577 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1172951 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675214 Other lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6046046 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4830353 Other La1.7 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR5341330 Other lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6789626 Other None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR9786617 Other lineage4.1.1.1 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR11081258 Other lineage4.8 None
SRR7535086 Other None
ERR4817731 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
ERR4816656 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR23961549 Other La1.2 None
ERR9786645 Other lineage4.6.2.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR6359082 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR25827682 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR28119805 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675270 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR1035157 Other lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None