Rv0006 - c.1113C>T


Drug resistance types
200 Sensitive 0 RR-TB 42 HR-TB 117 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 30 Other
lineage Counts
lineage Count
lineage1.1.2;lineage3.1.1 1
lineage3.1.1 330
lineage4.9 36
M.canetti;lineage4.2;lineage4.9 1
La1.7;lineage4.9;lineage7 3
La1.8.1 1
lineage2.2 3
lineage2.2.1 2
lineage4.4.2 1
lineage4.1.1.3 1
lineage4.2;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
lineage3.1.1;lineage4.3.4.2.1 1
lineage6.1.3 1
lineage4 1
lineage1.1.3.1 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage2.1 1
La1.7.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.2.1.2 2
La1.7;lineage4.9 3
lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
spoligotype Counts
spoligotype Count
None 396
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11775908 Sensitive lineage1.1.2;lineage3.1.1 None
SRR6046766 Other lineage3.1.1 None
ERR13432060 MDR-TB lineage3.1.1 None
SRR29093285 MDR-TB lineage3.1.1 None
ERR2245287 Sensitive lineage3.1.1 no
SRR2100922 Sensitive lineage3.1.1 None
SRR7069688 Sensitive lineage3.1.1 None
ERR926165 Sensitive lineage4.9 None
ERR2245277 Sensitive lineage3.1.1 no
ERR046775 Sensitive lineage3.1.1 gb
ERR2245340 Sensitive lineage3.1.1 no
ERR2510817 HR-TB lineage3.1.1 it
SRR16058127 Sensitive lineage3.1.1 None
ERR2245388 Sensitive lineage3.1.1 no
ERR2514179 Sensitive lineage3.1.1 gb
ERR386793 Sensitive lineage3.1.1 None
SRR3055241 Sensitive lineage3.1.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4822115 MDR-TB lineage3.1.1 None
SRR21733285 HR-TB lineage3.1.1 None
ERR7737632 MDR-TB lineage3.1.1 None
SRR21690693 Sensitive lineage3.1.1 None
ERR4820930 MDR-TB lineage3.1.1 gb
SRR3082081 MDR-TB lineage3.1.1 None
SRR1062878 MDR-TB lineage3.1.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR7131298 HR-TB lineage3.1.1 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR13290193 Sensitive lineage3.1.1 None
ERR2516594 MDR-TB lineage3.1.1 nl
ERR9286020 Sensitive lineage3.1.1 None
ERR6866410 Sensitive lineage4.9 None
ERR13285068 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR046860 Sensitive lineage3.1.1 gb
ERR11044063 Sensitive lineage3.1.1 None
ERR9285912 Sensitive lineage3.1.1 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR038265 Sensitive lineage3.1.1 gb
ERR7737646 MDR-TB lineage3.1.1 None
ERR7737701 MDR-TB lineage3.1.1 None
ERR2245301 MDR-TB lineage3.1.1 no
ERR2512453 Sensitive lineage3.1.1 None
ERR4819176 Sensitive lineage3.1.1 gb
ERR4797184 Sensitive lineage4.9 None
ERR040106 Sensitive lineage3.1.1 gb
ERR7737810 MDR-TB lineage3.1.1 None
ERR2514617 Sensitive lineage3.1.1 gb
ERR552923 HR-TB lineage3.1.1 de
ERR3275402 Sensitive lineage3.1.1 nl
ERR7737754 MDR-TB lineage3.1.1 None
ERR038299 Sensitive lineage3.1.1 gb
ERR387047 Sensitive lineage3.1.1 None
ERR11044276 HR-TB lineage3.1.1 None
SRR1146343 MDR-TB lineage3.1.1 None
DRR188519 Other lineage4.4.2 None
ERR7737934 MDR-TB lineage3.1.1 None
ERR11067288 Sensitive lineage3.1.1 None
ERR2517581 Sensitive lineage3.1.1 nl
ERR7737821 MDR-TB lineage3.1.1 None
ERR7737694 MDR-TB lineage3.1.1 None
ERR7737908 MDR-TB lineage3.1.1 None
ERR926164 Other lineage4.9 None
SRR9217364 Sensitive lineage4.1.1.3 None
ERR4830844 MDR-TB lineage3.1.1 et
SRR21689700 Sensitive lineage3.1.1 None
ERR2245303 Sensitive lineage3.1.1 no
ERR2245427 Other lineage3.1.1 no
ERR2515018 Sensitive lineage3.1.1 gb
ERR11050793 Other lineage3.1.1 None
SRR12882264 HR-TB lineage3.1.1 None
ERR038300 Sensitive lineage3.1.1 gb
ERR2513374 Sensitive lineage3.1.1 gb
ERR13289548 Sensitive lineage3.1.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
ERR11044727 Sensitive lineage3.1.1 None
ERR4819384 MDR-TB lineage3.1.1 None
ERR13290387 MDR-TB lineage3.1.1 None
ERR7737884 MDR-TB lineage3.1.1 None
ERR4830823 Pre-XDR-TB lineage3.1.1 et
ERR040107 Sensitive lineage3.1.1 gb
ERR046921 Sensitive lineage3.1.1 gb
ERR2512547 Sensitive lineage3.1.1 gb
ERR2516908 MDR-TB lineage3.1.1 gb
SRR1163239 MDR-TB lineage3.1.1 None
ERR13276225 MDR-TB lineage3.1.1 None
SRR29093848 MDR-TB lineage3.1.1 None
ERR2516634 MDR-TB lineage3.1.1 nl
ERR4817953 Sensitive lineage3.1.1 None
ERR11043850 Sensitive lineage3.1.1 None
ERR11050206 Sensitive lineage3.1.1 None
SRR2467269 Sensitive lineage3.1.1 None
ERR2517278 Sensitive lineage3.1.1 nl
ERR11068628 Sensitive lineage3.1.1 None
ERR11082919 Sensitive lineage3.1.1 None
SRR1163108 MDR-TB lineage3.1.1 None
ERR4820570 Sensitive lineage3.1.1 gb
SRR29093652 MDR-TB lineage3.1.1 None
ERR2512431 Sensitive lineage3.1.1 gb
ERR13290389 MDR-TB lineage3.1.1 None
ERR038264 Sensitive lineage3.1.1 gb
ERR046867 Sensitive lineage3.1.1 gb
ERR13290007 Sensitive lineage3.1.1 None
ERR926155 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR2245353 Sensitive lineage3.1.1 no
ERR2513898 HR-TB lineage3.1.1 gb
SRR7069771 Sensitive lineage3.1.1 None
SRR29096605 MDR-TB lineage3.1.1 None
SRR29093331 MDR-TB lineage3.1.1 None
SRR29093544 MDR-TB lineage3.1.1 None
ERR13284423 MDR-TB lineage3.1.1 None
ERR386894 Sensitive lineage3.1.1 None
ERR9027241 MDR-TB lineage3.1.1 None
SRR5341373 Other lineage4.9 None
SRR7069602 Sensitive lineage3.1.1 None
ERR2512776 Sensitive lineage3.1.1 gb
ERR2513552 Sensitive lineage3.1.1 gb
ERR7737935 MDR-TB lineage3.1.1 None
ERR4830836 MDR-TB lineage3.1.1 et
SAMN02414863 MDR-TB lineage3.1.1 se
SRR1163212 MDR-TB lineage3.1.1 None
ERR3275841 Sensitive lineage3.1.1 nl
ERR038266 Sensitive lineage3.1.1 gb
ERR351864 Other lineage3.1.1 None
SRR2100836 MDR-TB lineage3.1.1 None
SRR6045793 HR-TB lineage3.1.1 None
ERR387048 Sensitive lineage3.1.1 None
SRR5535933 Other lineage4.9 None
ERR11043851 Sensitive lineage3.1.1 None
SRR29096512 MDR-TB lineage3.1.1 None
ERR7737834 MDR-TB lineage3.1.1 None
ERR7737773 MDR-TB lineage3.1.1 None
ERR4188247 HR-TB lineage4.9 None
SRR5818578 Sensitive lineage3.1.1 dj
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR7737635 MDR-TB lineage3.1.1 None
SRR1144803 MDR-TB lineage3.1.1 None
SRR2101169 Sensitive lineage3.1.1 None
ERR2245292 Sensitive lineage3.1.1 no
ERR11082140 HR-TB lineage3.1.1 None
ERR7737794 MDR-TB lineage3.1.1 None
ERR7737689 MDR-TB lineage3.1.1 None
SRR6045968 Sensitive lineage3.1.1 gb
ERR2516903 MDR-TB lineage3.1.1 gb
SRR6045548 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4276852 MDR-TB lineage3.1.1 None
ERR4819416 Sensitive lineage3.1.1 gb
ERR2245299 Sensitive lineage3.1.1 no
ERR987774 MDR-TB lineage3.1.1 None
ERR4830811 MDR-TB lineage3.1.1 et
ERR550764 MDR-TB lineage3.1.1 None
ERR9285869 Sensitive lineage3.1.1;lineage4.3.4.2.1 None
ERR2514827 Sensitive lineage3.1.1 gb
SRR18213919 Sensitive lineage3.1.1 None
ERR046866 Sensitive lineage3.1.1 gb
ERR7737849 MDR-TB lineage3.1.1 None
SRR29096486 MDR-TB lineage3.1.1 None
ERR2245387 Sensitive lineage3.1.1 no
ERR9787256 Other lineage6.1.3 None
ERR4829101 MDR-TB lineage3.1.1 dj
ERR2514820 Sensitive lineage3.1.1 gb
ERR11044890 HR-TB lineage3.1.1 None
SRR6044887 Sensitive lineage3.1.1 gb
SRR16058440 Other lineage3.1.1 None
SRR18213929 Sensitive lineage3.1.1 None
ERR2245402 Sensitive lineage3.1.1 no
SRR6045516 Other lineage3.1.1 None
ERR2446116 Sensitive lineage3.1.1 nl
ERR038273 Sensitive lineage3.1.1 gb
ERR046861 Sensitive lineage3.1.1 gb
ERR2512508 Sensitive lineage3.1.1 gb
ERR161037 Other lineage4.9 None
ERR2513493 Sensitive lineage3.1.1 gb
ERR2245347 Sensitive lineage3.1.1 no
ERR4815512 HR-TB lineage3.1.1 gb
ERR7737779 MDR-TB lineage3.1.1 None
ERR926161 Sensitive lineage4.9 None
ERR9285834 Sensitive lineage3.1.1 None
SRR6511621 Sensitive lineage4.9 None
ERR4830816 Pre-XDR-TB lineage3.1.1 et
ERR3273109 HR-TB lineage4 None
SRR1163124 MDR-TB lineage3.1.1 None
ERR926163 Other lineage4.9 None
ERR2851369 MDR-TB lineage3.1.1 lb
SRR2101200 Sensitive lineage3.1.1 None
SRR2101202 Other lineage3.1.1 None
ERR2516860 HR-TB lineage3.1.1 gb
ERR4819235 MDR-TB lineage3.1.1 None
ERR2245348 Sensitive lineage3.1.1 None
ERR2515024 HR-TB lineage3.1.1 gb
ERR2513435 Sensitive lineage3.1.1 gb
ERR4816466 HR-TB lineage4.9 None
SRR29093798 MDR-TB lineage3.1.1 None
SRR16058187 HR-TB lineage3.1.1 None
ERR926154 Sensitive lineage4.9 None
SRR29093486 MDR-TB lineage3.1.1 None
ERR12115319 Sensitive lineage3.1.1 None
SRR12416842 HR-TB lineage4.9 None
ERR4821223 Sensitive lineage3.1.1 None
ERR7737829 MDR-TB lineage3.1.1 None
SRR7068938 Sensitive lineage3.1.1 None
ERR2516567 MDR-TB lineage3.1.1 nl
ERR8479578 Sensitive lineage1.1.3.1 None
ERR2513614 Sensitive lineage3.1.1 gb
ERR2510701 MDR-TB lineage3.1.1 it
SRR7069912 HR-TB lineage3.1.1 None
ERR2513599 Sensitive lineage3.1.1 gb
SRR2101183 Sensitive lineage3.1.1 None
ERR3797086 Sensitive lineage4.9 None
ERR11067286 Sensitive lineage3.1.1 None
ERR2245383 Sensitive lineage3.1.1 no
ERR2245337 Other lineage3.1.1 no
ERR2245338 Other lineage3.1.1 no
SRR29093751 MDR-TB lineage3.1.1 None
ERR7737861 MDR-TB lineage3.1.1 None
SRR3082093 MDR-TB lineage3.1.1 None
ERR4819373 MDR-TB lineage3.1.1 gb
ERR4799513 HR-TB lineage2.2 None
ERR046845 Sensitive lineage3.1.1 gb
ERR4818702 Sensitive lineage3.1.1 gb
ERR2245295 Sensitive lineage3.1.1 no
ERR4829106 MDR-TB lineage3.1.1 dj
ERR2517003 MDR-TB lineage3.1.1 gb
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR4830818 Pre-XDR-TB lineage3.1.1 et
ERR11082276 HR-TB lineage3.1.1 None
SRR3082092 MDR-TB lineage3.1.1 None
SRR29053435 Sensitive lineage3.1.1 None
ERR4830800 MDR-TB lineage3.1.1 et
ERR038269 Sensitive lineage3.1.1 gb
ERR4819267 Sensitive lineage3.1.1 None
ERR11081584 HR-TB lineage3.1.1 None
ERR11068677 Sensitive lineage3.1.1 None
SRR3085342 MDR-TB lineage3.1.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR11043874 Sensitive lineage3.1.1 None
ERR4816645 MDR-TB lineage3.1.1 None
SAMN02380989 MDR-TB lineage3.1.1 ug
ERR4830832 MDR-TB lineage3.1.1 et
SAMN02414898 MDR-TB lineage3.1.1 se
ERR4830817 Pre-XDR-TB lineage3.1.1 et
ERR10465784 Sensitive lineage3.1.1 None
ERR2514625 Sensitive lineage3.1.1 gb
ERR9125702 HR-TB lineage3.1.1 None
ERR13289828 HR-TB lineage3.1.1 None
ERR13289882 Sensitive lineage3.1.1 None
ERR4830790 Pre-XDR-TB lineage3.1.1 et
ERR2513640 Sensitive lineage3.1.1 gb
ERR2516755 HR-TB lineage3.1.1 gb
ERR270726 MDR-TB lineage3.1.1 None
ERR926156 Sensitive lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
ERR1367631 HR-TB lineage3.1.1 None
ERR2245289 Sensitive lineage3.1.1 no
SRR7240492 HR-TB La1.7.1 None
ERR2514930 Sensitive lineage3.1.1 gb
SRR6045217 Sensitive lineage4.9 None
ERR4815851 Sensitive lineage3.1.1 None
ERR4817398 Other lineage3.1.1 None
SRR5818636 MDR-TB lineage3.1.1 dj
ERR11044215 MDR-TB lineage3.1.1 None
ERR4830786 Pre-XDR-TB lineage3.1.1 et
ERR7737744 MDR-TB lineage3.1.1 None
ERR7737899 MDR-TB lineage3.1.1 None
ERR13290078 Sensitive lineage3.1.1 None
ERR4830819 HR-TB lineage3.1.1 et
ERR926157 Sensitive lineage4.9 None
ERR2514127 Sensitive lineage3.1.1 gb
ERR11067289 Sensitive lineage3.1.1 None
ERR9125631 Sensitive lineage3.1.1 None
SRR29096341 MDR-TB lineage3.1.1 None
ERR3797029 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR6045138 Other lineage3.1.1 None
SRR6045159 Other lineage3.1.1 None
SRR6045186 Sensitive lineage3.1.1 gb
ERR4819313 Sensitive lineage3.1.1 None
ERR2245421 MDR-TB lineage3.1.1 no
ERR2245400 Other lineage3.1.1 no
ERR7737695 MDR-TB lineage3.1.1 None
SRR7069016 Sensitive lineage3.1.1 None
ERR7737915 MDR-TB lineage3.1.1 None
ERR4814541 MDR-TB lineage3.1.1 gb
SRR7070167 Sensitive lineage3.1.1 None
SRR21690740 Sensitive lineage3.1.1 None
SRR1175127 Other lineage2.2.1.2 None
ERR7737863 MDR-TB lineage3.1.1 None
ERR351862 Sensitive lineage3.1.1 None
SAMN03648095 Sensitive lineage3.1.1 None
SRR7069329 Sensitive lineage3.1.1 None
ERR351861 Sensitive lineage3.1.1 None
ERR11068681 Sensitive lineage3.1.1 None
SRR5818620 MDR-TB lineage3.1.1 dj
SRR1140663 MDR-TB lineage3.1.1 None
ERR117714 Sensitive lineage3.1.1 None
ERR046847 Sensitive lineage3.1.1 gb
SRR16100708 HR-TB lineage3.1.1 None
SRR29094056 MDR-TB lineage3.1.1 None
ERR7737825 MDR-TB lineage3.1.1 None
ERR11043873 Sensitive lineage3.1.1 None
ERR11067776 Sensitive lineage3.1.1 None
ERR9119669 HR-TB lineage4.9 None
ERR2245355 Sensitive lineage3.1.1 None
ERR4829093 MDR-TB lineage3.1.1 dj
SRR5341400 Sensitive lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR7070641 Sensitive lineage3.1.1 None
SRR29096556 MDR-TB lineage3.1.1 None
ERR270737 MDR-TB lineage3.1.1 None
ERR038270 Sensitive lineage3.1.1 gb
ERR330745 Sensitive lineage3.1.1 None
ERR7737687 MDR-TB lineage3.1.1 None
ERR2513593 Sensitive lineage3.1.1 gb
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR13289976 Sensitive lineage3.1.1 None
ERR386794 Sensitive lineage3.1.1 None
ERR2514168 Sensitive lineage3.1.1 gb
ERR11044373 HR-TB lineage3.1.1 None
ERR7737914 MDR-TB lineage3.1.1 None
ERR4818723 MDR-TB lineage3.1.1 gb
ERR4830788 Pre-XDR-TB lineage3.1.1 et
SRR3085335 MDR-TB lineage3.1.1 None
SRR2100574 Sensitive lineage3.1.1 None
SRR29096976 Sensitive lineage3.1.1 None
ERR4817464 Sensitive lineage3.1.1 None
SRR6046000 Sensitive lineage3.1.1 gb
ERR926158 Sensitive lineage4.9 None
ERR1023324 MDR-TB lineage3.1.1 None
ERR124636 Sensitive lineage4.9 None
ERR038272 Sensitive lineage3.1.1 gb
ERR2245279 Sensitive lineage3.1.1 no
ERR11067292 Sensitive lineage3.1.1 None
ERR7737916 MDR-TB lineage3.1.1 None
ERR7737901 MDR-TB lineage3.1.1 None
ERR1063846 HR-TB lineage4.9 None
ERR9125788 Sensitive lineage3.1.1 None
ERR228220 Sensitive lineage3.1.1 None
ERR11082269 Sensitive lineage3.1.1 None
SRR2101199 Sensitive lineage3.1.1 None
ERR7737668 MDR-TB lineage3.1.1 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2512873 Sensitive lineage3.1.1 gb
SRR29093523 MDR-TB lineage3.1.1 None
ERR7737742 MDR-TB lineage3.1.1 None
ERR046854 Sensitive lineage3.1.1 gb
ERR11067691 Sensitive lineage3.1.1 None
ERR926159 Sensitive lineage4.9 None
ERR4822289 MDR-TB lineage3.1.1 None
ERR2245416 HR-TB lineage3.1.1 no
ERR038271 Sensitive lineage3.1.1 gb
ERR971389 Sensitive lineage4.9 None
ERR9286146 Sensitive lineage3.1.1 None
ERR330731 Sensitive lineage3.1.1 None
SRR7069207 Sensitive lineage3.1.1 None
ERR278535 Sensitive lineage3.1.1 None
ERR9286124 Sensitive lineage3.1.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR11044605 MDR-TB lineage3.1.1 None
ERR4817270 Sensitive lineage3.1.1 gb
SRR5818617 MDR-TB lineage3.1.1 dj
ERR2512375 Sensitive lineage3.1.1 no
ERR2512405 Sensitive lineage3.1.1 gb
SRR28858380 MDR-TB lineage3.1.1 None
SRR6046555 Sensitive lineage3.1.1 gb
ERR386796 Other lineage3.1.1 None
ERR13290386 MDR-TB lineage3.1.1 None
ERR1367628 Sensitive lineage3.1.1 None
SRR5818704 Sensitive lineage3.1.1 dj
ERR4819611 Sensitive lineage3.1.1 None
ERR7737835 MDR-TB lineage3.1.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR779852 Sensitive lineage4.9 None
ERR7737870 MDR-TB lineage3.1.1 None
ERR387034 Sensitive lineage3.1.1 None
ERR4816171 MDR-TB lineage3.1.1 None
SRR26331611 Sensitive lineage4.9 None
ERR2514634 Sensitive lineage3.1.1 gb
ERR11082918 Sensitive lineage3.1.1 None
ERR11067290 Sensitive lineage3.1.1 None
ERR11067602 Sensitive lineage3.1.1 None
ERR4829765 HR-TB lineage3.1.1 None
ERR2503469 Sensitive lineage3.1.1 fi
ERR2513979 Sensitive lineage3.1.1 gb
ERR7737891 MDR-TB lineage3.1.1 None
ERR13290096 Sensitive lineage3.1.1 None
ERR4816245 Sensitive lineage3.1.1 gb
SRR5341456 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR3283025 MDR-TB La1.7;lineage4.9 None