Rv0006 - c.1113C>T
Drug resistance types
172 Sensitive
0 RR-TB
57 HR-TB
99 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 2 |
| lineage3.1.1 | 289 |
| 35 | |
| lineage4.1 | 1 |
| lineage4 | 20 |
| lineage2.2.1 | 4 |
| lineage4.1.1.3 | 1 |
| lineage4.4.2 | 1 |
| lineage4;lineage3.1.1 | 1 |
| lineage4.9 | 4 |
| lineage2.2 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2.1;lineage3.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| La1.8.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4;lineage3 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 372 |
Geographic prevalence
Country level data for this variant is available for 135 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2851355 | MDR-TB | lineage3 | None | ERR2851369 | MDR-TB | lineage3.1.1 | lb | ERR4830800 | MDR-TB | lineage3.1.1 | et | ERR4830811 | MDR-TB | lineage3.1.1 | et | ERR4829101 | MDR-TB | lineage3.1.1 | dj | ERR4830816 | Pre-XDR-TB | lineage3.1.1 | et | ERR4829093 | MDR-TB | lineage3.1.1 | dj | ERR4829106 | MDR-TB | lineage3.1.1 | dj | ERR4830817 | Pre-XDR-TB | lineage3.1.1 | et | ERR4830823 | Pre-XDR-TB | lineage3.1.1 | et | ERR4830818 | Pre-XDR-TB | lineage3.1.1 | et | ERR4829765 | HR-TB | lineage3.1.1 | None | ERR4830819 | HR-TB | lineage3.1.1 | et | ERR4830832 | MDR-TB | lineage3.1.1 | et | ERR4830836 | MDR-TB | lineage3.1.1 | et | ERR4830844 | MDR-TB | lineage3.1.1 | et | ERR4830788 | Pre-XDR-TB | lineage3.1.1 | et | ERR11067291 | Sensitive | lineage3.1.1 | None | ERR4830786 | Pre-XDR-TB | lineage3.1.1 | et | ERR4830790 | Pre-XDR-TB | lineage3.1.1 | et | SRR6046555 | Sensitive | lineage3.1.1 | gb | ERR552923 | HR-TB | lineage3.1.1 | de | ERR11067290 | Sensitive | lineage3.1.1 | None | SRR6046475 | Sensitive | lineage3.1.1 | gb | SRR6046766 | Other | lineage3.1.1 | None | ERR11067292 | Sensitive | lineage3.1.1 | None | SRR6511621 | HR-TB | None | ERR11067286 | Sensitive | lineage3.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR11067288 | Sensitive | lineage3.1.1 | None | SRR7131298 | HR-TB | lineage3.1.1 | None | SAMN02414898 | MDR-TB | lineage3.1.1 | se | ERR502510 | Sensitive | lineage4 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | ERR11067602 | Sensitive | lineage3.1.1 | None | SRR9217364 | Sensitive | lineage4.1.1.3 | None | ERR323041 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR038265 | Sensitive | lineage3.1.1 | gb | ERR323108 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR038270 | Sensitive | lineage3.1.1 | gb | ERR038264 | Sensitive | lineage3.1.1 | gb | ERR038269 | Sensitive | lineage3.1.1 | gb | ERR038266 | Sensitive | lineage3.1.1 | gb | ERR038273 | Sensitive | lineage3.1.1 | gb | ERR038272 | Sensitive | lineage3.1.1 | gb | ERR038271 | Sensitive | lineage3.1.1 | gb | ERR038300 | Sensitive | lineage3.1.1 | gb | ERR038299 | Sensitive | lineage3.1.1 | gb | ERR046775 | Sensitive | lineage3.1.1 | gb | ERR040107 | Sensitive | lineage3.1.1 | gb | ERR040106 | Sensitive | lineage3.1.1 | gb | ERR046845 | Sensitive | lineage3.1.1 | gb | ERR046854 | Sensitive | lineage3.1.1 | gb | ERR046866 | Sensitive | lineage3.1.1 | gb | ERR046860 | Sensitive | lineage3.1.1 | gb | ERR046867 | Sensitive | lineage3.1.1 | gb | ERR046847 | Sensitive | lineage3.1.1 | gb | ERR046861 | Sensitive | lineage3.1.1 | gb | ERR10465784 | Sensitive | lineage3.1.1 | None | ERR1023324 | MDR-TB | lineage3.1.1 | None | ERR1035122 | Sensitive | None | ERR046921 | Sensitive | lineage3.1.1 | gb | ERR11043873 | Sensitive | lineage3.1.1 | None | ERR11043850 | Sensitive | lineage3.1.1 | None | ERR11043851 | Sensitive | lineage3.1.1 | None | ERR11043874 | Sensitive | lineage3.1.1 | None | ERR11044215 | MDR-TB | lineage3.1.1 | None | ERR11044063 | Sensitive | lineage3.1.1 | None | ERR11044890 | HR-TB | lineage3.1.1 | None | ERR11044276 | HR-TB | lineage3.1.1 | None | ERR11044373 | HR-TB | lineage4;lineage3.1.1 | None | ERR11044605 | MDR-TB | lineage3.1.1 | None | ERR11044727 | Sensitive | lineage3.1.1 | None | ERR117714 | Sensitive | lineage3.1.1 | None | ERR3283014 | HR-TB | None | ERR1367628 | Sensitive | lineage3.1.1 | None | ERR1367631 | HR-TB | lineage3.1.1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR351862 | Sensitive | lineage3.1.1 | None | ERR330731 | Sensitive | lineage3.1.1 | None | ERR3445504 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR330745 | Sensitive | lineage3.1.1 | None | ERR351861 | Sensitive | lineage3.1.1 | None | ERR3797048 | HR-TB | None | ERR351864 | Other | lineage3.1.1 | None | ERR3797063 | HR-TB | None | ERR4024991 | Other | None | ERR386796 | Other | lineage3.1.1 | None | ERR387034 | Sensitive | lineage3.1.1 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR386794 | Sensitive | lineage3.1.1 | None | ERR386793 | Sensitive | lineage3.1.1 | None | ERR386894 | Sensitive | lineage3.1.1 | None | ERR387048 | Sensitive | lineage3.1.1 | None | ERR387047 | Sensitive | lineage3.1.1 | None | ERR4276852 | MDR-TB | lineage3.1.1 | None | ERR4188247 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4797474 | Other | None | ERR6866022 | Other | None | ERR6336765 | HR-TB | None | ERR6358991 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR7737635 | MDR-TB | lineage3.1.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR7737668 | MDR-TB | lineage3.1.1 | None | ERR7737632 | MDR-TB | lineage3.1.1 | None | ERR7737646 | MDR-TB | lineage3.1.1 | None | ERR7737687 | MDR-TB | lineage3.1.1 | None | ERR7737695 | MDR-TB | lineage3.1.1 | None | ERR7737689 | MDR-TB | lineage3.1.1 | None | ERR7737701 | MDR-TB | lineage3.1.1 | None | ERR7737694 | MDR-TB | lineage3.1.1 | None | ERR7737779 | MDR-TB | lineage3.1.1 | None | ERR7737742 | MDR-TB | lineage3.1.1 | None | ERR7737744 | MDR-TB | lineage3.1.1 | None | ERR7737754 | MDR-TB | lineage3.1.1 | None | ERR7737773 | MDR-TB | lineage3.1.1 | None | ERR7737834 | MDR-TB | lineage3.1.1 | None | ERR7737821 | MDR-TB | lineage3.1.1 | None | ERR7737794 | MDR-TB | lineage3.1.1 | None | ERR7737810 | MDR-TB | lineage3.1.1 | None | ERR7737825 | MDR-TB | lineage3.1.1 | None | ERR7737870 | MDR-TB | lineage3.1.1 | None | ERR7737835 | MDR-TB | lineage3.1.1 | None | ERR7737863 | MDR-TB | lineage3.1.1 | None | ERR7737829 | MDR-TB | lineage3.1.1 | None | ERR7737849 | MDR-TB | lineage3.1.1 | None | ERR7737861 | MDR-TB | lineage3.1.1 | None | ERR7737899 | MDR-TB | lineage3.1.1 | None | ERR7737891 | MDR-TB | lineage3.1.1 | None | ERR7737884 | MDR-TB | lineage3.1.1 | None | ERR7737901 | MDR-TB | lineage3.1.1 | None | ERR7737908 | MDR-TB | lineage3.1.1 | None | ERR7737916 | MDR-TB | lineage3.1.1 | None | ERR7737914 | MDR-TB | lineage3.1.1 | None | ERR7737915 | MDR-TB | lineage3.1.1 | None | ERR7737935 | MDR-TB | lineage3.1.1 | None | ERR7737934 | MDR-TB | lineage3.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9125788 | Sensitive | lineage3.1.1 | None | ERR9027241 | MDR-TB | lineage3.1.1 | None | ERR9119669 | HR-TB | None | ERR9125702 | HR-TB | lineage3.1.1 | None | ERR9125631 | Sensitive | lineage3.1.1 | None | ERR9285834 | Sensitive | lineage3.1.1 | None | ERR9285869 | Sensitive | lineage4.3.4.2.1;lineage3.1.1 | None | ERR9286124 | Sensitive | lineage3.1.1 | None | ERR9285912 | Sensitive | lineage3.1.1 | None | ERR9286020 | Sensitive | lineage3.1.1 | None | ERR9286146 | Sensitive | lineage3.1.1 | None | ERR987774 | MDR-TB | lineage3.1.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR11050206 | Sensitive | lineage3.1.1 | None | SRR1163108 | MDR-TB | lineage3.1.1 | None | SRR1062878 | MDR-TB | lineage3.1.1 | None | SRR1144803 | MDR-TB | lineage3.1.1 | None | SRR1140663 | MDR-TB | lineage3.1.1 | None | SRR1146343 | MDR-TB | lineage3.1.1 | None | SRR1163239 | MDR-TB | lineage3.1.1 | None | SRR1163124 | MDR-TB | lineage3.1.1 | None | SRR1163212 | MDR-TB | lineage3.1.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173310 | MDR-TB | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR11972220 | HR-TB | lineage2.2.1.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR16100708 | HR-TB | lineage3.1.1 | None | SRR12882264 | HR-TB | lineage3.1.1 | None | SRR16058127 | Sensitive | lineage3.1.1 | None | SRR16058440 | Sensitive | lineage3.1.1 | None | SRR16058187 | HR-TB | lineage3.1.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR18213929 | Sensitive | lineage3.1.1 | None | ERR11050793 | Other | lineage3.1.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18213919 | Sensitive | lineage3.1.1 | None | SRR19318149 | Sensitive | lineage3.1.1 | None | SRR2101183 | Sensitive | lineage3.1.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR2100574 | Sensitive | lineage3.1.1 | None | SRR2100836 | MDR-TB | lineage3.1.1 | None | SRR2100922 | Sensitive | lineage3.1.1 | None | SRR2101169 | Sensitive | lineage3.1.1 | None | SRR2101199 | Sensitive | lineage3.1.1 | None | ERR11067776 | Sensitive | lineage3.1.1 | None | SRR2101200 | Sensitive | lineage3.1.1 | None | SRR2101202 | Other | lineage3.1.1 | None | ERR11067691 | Sensitive | lineage3.1.1 | None | ERR11068681 | Sensitive | lineage3.1.1 | None | ERR11068628 | Sensitive | lineage3.1.1 | None | ERR11068677 | Sensitive | lineage3.1.1 | None | ERR11081584 | HR-TB | lineage3.1.1 | None | ERR11082140 | HR-TB | lineage3.1.1 | None | ERR11082269 | Sensitive | lineage3.1.1 | None | ERR11082918 | Sensitive | lineage3.1.1 | None | ERR11082276 | HR-TB | lineage3.1.1 | None | SRR8692887 | Other | None | ERR11082919 | Sensitive | lineage3.1.1 | None | SRR2467269 | Sensitive | lineage3.1.1 | None | SRR3082081 | MDR-TB | lineage3.1.1 | None | SRR3055241 | Sensitive | lineage3.1.1 | None | SRR3082092 | MDR-TB | lineage3.1.1 | None | SRR3085335 | MDR-TB | lineage3.1.1 | None | SRR3082093 | MDR-TB | lineage3.1.1 | None | SAMN03648095 | Sensitive | lineage3.1.1 | None | ERR4814541 | MDR-TB | lineage3.1.1 | gb | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3085342 | MDR-TB | lineage3.1.1 | None | ERR4815512 | HR-TB | lineage3.1.1 | gb | SRR3675246 | Sensitive | lineage4 | None | ERR4815851 | Sensitive | lineage3.1.1 | None | ERR176751 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817464 | Other | lineage3.1.1 | None | SAMN02414863 | MDR-TB | lineage3.1.1 | se | ERR4816171 | MDR-TB | lineage3.1.1 | None | ERR212123 | Other | None | ERR4816245 | Sensitive | lineage3.1.1 | gb | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817270 | Sensitive | lineage3.1.1 | gb | ERR4816645 | MDR-TB | lineage3.1.1 | None | ERR2446116 | Sensitive | lineage3.1.1 | nl | ERR2245277 | HR-TB | lineage3.1.1 | no | ERR2245279 | Sensitive | lineage3.1.1 | no | ERR2245280 | Other | lineage4;lineage3 | no | ERR2245289 | Sensitive | lineage3.1.1 | no | ERR2245299 | Sensitive | lineage3.1.1 | no | ERR2245287 | Sensitive | lineage3.1.1 | no | ERR2245303 | Sensitive | lineage3.1.1 | no | ERR2245301 | MDR-TB | lineage3.1.1 | no | ERR2245295 | Sensitive | lineage3.1.1 | no | ERR2245292 | HR-TB | lineage3.1.1 | no | ERR2245337 | Other | lineage3.1.1 | no | ERR2245338 | Other | lineage3.1.1 | no | ERR2245346 | HR-TB | lineage3.1.1 | no | ERR2245340 | Other | lineage3.1.1 | no | ERR2245347 | Sensitive | lineage3.1.1 | no | ERR2245355 | Sensitive | lineage3.1.1 | None | ERR2245348 | Sensitive | lineage3.1.1 | None | ERR2245387 | Sensitive | lineage3.1.1 | no | ERR2245353 | Sensitive | lineage3.1.1 | no | ERR2245358 | Sensitive | lineage4.9 | None | ERR2245383 | Sensitive | lineage3.1.1 | no | ERR2245359 | Sensitive | lineage4.9 | None | ERR2245378 | Other | lineage3.1.1 | no | ERR4818702 | Sensitive | lineage3.1.1 | gb | ERR2245402 | Sensitive | lineage3.1.1 | no | ERR2245416 | HR-TB | lineage3.1.1 | no | ERR2245427 | Other | lineage3.1.1 | no | ERR2245388 | Sensitive | lineage3.1.1 | no | ERR2245400 | Other | lineage3.1.1 | no | ERR2245421 | MDR-TB | lineage3.1.1 | no | ERR2513374 | Sensitive | lineage3.1.1 | gb | ERR228220 | Sensitive | lineage3.1.1 | None | ERR2510817 | HR-TB | lineage3.1.1 | it | ERR4818723 | MDR-TB | lineage3.1.1 | gb | ERR2510701 | MDR-TB | lineage3.1.1 | it | ERR4817953 | Sensitive | lineage3.1.1 | None | ERR2512431 | Sensitive | lineage3.1.1 | gb | ERR2512377 | Other | lineage3.1.1 | no | ERR2512405 | Sensitive | lineage3.1.1 | gb | ERR2512375 | Sensitive | lineage3.1.1 | no | ERR2512453 | Sensitive | lineage3.1.1 | None | ERR2512508 | Sensitive | lineage3.1.1 | gb | ERR2513435 | Sensitive | lineage3.1.1 | gb | ERR2512547 | Sensitive | lineage3.1.1 | gb | ERR2512776 | Sensitive | lineage3.1.1 | gb | ERR11067179 | Sensitive | lineage3.1.1 | None | ERR2503469 | Sensitive | lineage3.1.1 | fi | ERR2513552 | Sensitive | lineage3.1.1 | gb | SAMN02380989 | MDR-TB | lineage3.1.1 | ug | ERR550764 | MDR-TB | lineage3.1.1 | None | ERR2512873 | Sensitive | lineage3.1.1 | gb | ERR2041716 | MDR-TB | lineage2.2.1 | None | ERR2513493 | Sensitive | lineage3.1.1 | gb | ERR2513593 | Sensitive | lineage3.1.1 | gb | ERR2513599 | Sensitive | lineage3.1.1 | gb | ERR2513614 | Sensitive | lineage3.1.1 | gb | ERR2516903 | MDR-TB | lineage3.1.1 | gb | ERR2513640 | Sensitive | lineage3.1.1 | gb | SRR5341373 | HR-TB | lineage4 | None | ERR2513898 | HR-TB | lineage3.1.1 | gb | ERR2516908 | MDR-TB | lineage3.1.1 | gb | ERR4819176 | Other | lineage3.1.1 | gb | SRR5341387 | Other | lineage4 | None | ERR4819235 | MDR-TB | lineage3.1.1 | None | ERR2517278 | Sensitive | lineage3.1.1 | nl | ERR4819267 | Sensitive | lineage3.1.1 | None | ERR2516567 | MDR-TB | lineage3.1.1 | nl | SRR5341400 | HR-TB | lineage4 | None | ERR2513979 | Sensitive | lineage3.1.1 | gb | ERR4819373 | MDR-TB | lineage3.1.1 | gb | ERR4819384 | MDR-TB | lineage3.1.1 | None | ERR2514127 | Sensitive | lineage3.1.1 | gb | ERR2514168 | Sensitive | lineage3.1.1 | gb | ERR2514179 | Sensitive | lineage3.1.1 | gb | SRR5341432 | HR-TB | lineage4 | None | ERR4819313 | Other | lineage3.1.1 | None | SRR5341456 | Other | None | SRR5341408 | Sensitive | lineage3 | None | ERR4819416 | Sensitive | lineage3.1.1 | gb | ERR2517003 | MDR-TB | lineage3.1.1 | gb | ERR4819611 | Sensitive | lineage3.1.1 | None | ERR2516594 | MDR-TB | lineage3.1.1 | nl | ERR2516634 | MDR-TB | lineage3.1.1 | nl | SRR5341293 | HR-TB | lineage4 | None | ERR3275402 | Sensitive | lineage3.1.1 | nl | ERR2514617 | Sensitive | lineage3.1.1 | gb | ERR2514827 | Sensitive | lineage3.1.1 | gb | ERR2514634 | Sensitive | lineage3.1.1 | gb | ERR2514625 | Sensitive | lineage3.1.1 | gb | SRR5341299 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | ERR2514820 | Sensitive | lineage3.1.1 | gb | ERR4820570 | Sensitive | lineage3.1.1 | gb | SRR5341313 | HR-TB | None | ERR2515018 | Sensitive | lineage3.1.1 | gb | ERR2516755 | HR-TB | lineage3.1.1 | gb | ERR2514930 | Sensitive | lineage3.1.1 | gb | ERR2515024 | HR-TB | lineage3.1.1 | gb | ERR4820930 | MDR-TB | lineage3.1.1 | gb | ERR2516860 | HR-TB | lineage3.1.1 | gb | SRR6045516 | Other | lineage3.1.1 | None | ERR2517581 | Sensitive | lineage3.1.1 | nl | SRR5535933 | HR-TB | None | ERR270726 | MDR-TB | lineage3.1.1 | None | ERR278535 | Sensitive | lineage3.1.1 | None | ERR270737 | MDR-TB | lineage3.1.1 | None | ERR4822115 | MDR-TB | lineage3.1.1 | None | ERR4821223 | Sensitive | lineage3.1.1 | None | ERR3275841 | Sensitive | lineage3.1.1 | nl | ERR4821655 | Sensitive | lineage4 | None | ERR4822289 | MDR-TB | lineage3.1.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR5818636 | MDR-TB | lineage3.1.1 | dj | SRR5818578 | Sensitive | lineage3.1.1 | dj | SRR5818617 | MDR-TB | lineage3.1.1 | dj | SRR6045793 | HR-TB | lineage3.1.1 | None | SRR5818620 | MDR-TB | lineage3.1.1 | dj | SRR6045186 | Sensitive | lineage3.1.1 | gb | SRR5818698 | Sensitive | lineage1.1.2 | dj | SRR6045968 | Sensitive | lineage3.1.1 | gb | SRR6046000 | Sensitive | lineage3.1.1 | gb | SRR6045159 | Other | lineage3.1.1 | None | SRR5818704 | Sensitive | lineage3.1.1 | dj | SRR6045892 | Sensitive | None | SRR6044887 | Sensitive | lineage3.1.1 | gb | SRR6045138 | Other | lineage3.1.1 | None | SRR6045217 | Other | lineage4 | None | SRR6046299 | HR-TB | None | ERR11067289 | Sensitive | lineage3.1.1 | None |
|---|
