Rv0701 - c.459A>T
Drug resistance types
5 Sensitive
1 RR-TB
91 HR-TB
17 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| 110 | |
| lineage4.1.2.1 | 10 |
| lineage4 | 9 |
| lineage2.2.1 | 7 |
| lineage4.9 | 9 |
| lineage4.6.2.2 | 3 |
| lineage5.2 | 2 |
| lineage3.1 | 3 |
| La2 | 1 |
| lineage4.7 | 1 |
| La1 | 1 |
| lineage4.8 | 3 |
| lineage3 | 2 |
| lineage4.1.3 | 2 |
| lineage2 | 3 |
| lineage1.1.2 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.3.3 | 2 |
| lineage2.2.1.1 | 1 |
| lineage2.2 | 3 |
| lineage4;lineage3.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 1 |
| lineage4.9;La3 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 194 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818347 | Other | lineage4.1.2 | None | SRR5341418 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819280 | Sensitive | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | ERR2514692 | Other | None | SRR5535933 | HR-TB | None | ERR1023509 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR6045526 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6045217 | Other | lineage4 | None | ERR278594 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046824 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | SRR6789626 | Other | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | SRR7496517 | Other | None | ERR502889 | Other | None | SRR7496509 | Other | None | SRR8217918 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR323055 | HR-TB | None | ERR323038 | HR-TB | None | SRR7535086 | Other | None | ERR323043 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067681 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR1034652 | Other | None | ERR1063862 | HR-TB | None | ERR11049020 | Other | lineage4.8 | None | ERR133986 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3797036 | HR-TB | None | ERR3797069 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4407463 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR702404 | HR-TB | None | ERR6358837 | HR-TB | None | ERR702406 | HR-TB | None | ERR9786671 | Other | None | ERR736839 | Other | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119669 | HR-TB | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR736867 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9786843 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1172857 | MDR-TB | None | SRR1172234 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173153 | HR-TB | None | SRR1172951 | Other | None | SRR1173400 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173384 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184381 | MDR-TB | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184294 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1184388 | Other | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR19428551 | Sensitive | lineage4;lineage3.1.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR1640750 | HR-TB | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR25827682 | Other | None | SRR26159043 | Other | lineage4.9 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR158583 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675502 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | SRR3675311 | Other | None | ERR4816999 | Other | None | ERR212123 | Other | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4817735 | Other | lineage4.8 | None | SRR7496472 | Other | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | ERR1035162 | Other | None |
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