Rv3596c - p.Met379Ile
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
17 Sensitive
2 RR-TB
27 HR-TB
10 MDR-TB
3 Pre-XDR-TB
2 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.9 | 38 |
| La1.7;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| La3;lineage4.9 | 1 |
| lineage2.2.1 | 7 |
| lineage2.2.1.2 | 3 |
| lineage3 | 1 |
| lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.3;lineage4.8 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.8 | 1 |
| lineage4.3.2 | 2 |
| lineage4.5 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.1.3 | 2 |
| La1;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| M.canetti;lineage2.2 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 95 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR13284286 | MDR-TB | lineage4.1.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR5341373 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR29230878 | Sensitive | lineage3 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR3675270 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4799025 | Other | lineage4.8 | None | ERR2446566 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR212123 | Other | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR9121684 | Sensitive | lineage4.3.2 | None | ERR752229 | Other | lineage4.5 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR21279414 | Pre-XDR-TB | lineage2.2.2 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR6046878 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | ERR4195600 | Sensitive | lineage4.3.2 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5535933 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR11043376 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None |
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