lineage | Count |
---|---|
63 | |
lineage4.1 | 2 |
La1.8.1 | 2 |
lineage3.1 | 1 |
lineage4 | 13 |
lineage2.2.1.1 | 6 |
lineage4.1.2.1 | 1 |
lineage2.2 | 4 |
lineage4.9 | 10 |
lineage4.8 | 2 |
lineage4.5 | 1 |
lineage1.1.3.1 | 1 |
lineage2.2.1.2 | 2 |
lineage2.2.1 | 4 |
lineage4.2.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage3 | 1 |
lineage4;lineage2.2 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage1.2.2.2 | 1 |
lineage3.1.2 | 1 |
lineage1.1 | 1 |
spoligotype | Count |
---|---|
None | 120 |
ID | Drug resistance | Lineage | Country iso2 | ERR294248 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323055 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | SRR8600047 | Other | La1.8.1 | None | ERR323045 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1063858 | HR-TB | None | ERR323063 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR031468 | Sensitive | lineage2.2.1.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283017 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR5864895 | Pre-XDR-TB | lineage4.8 | None | ERR4811493 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866410 | Sensitive | None | SRR24083742 | Sensitive | lineage2.2.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR21733324 | Sensitive | lineage2.2.1.1 | None | SRR13861434 | RR-TB | lineage4.9 | None | ERR8976043 | HR-TB | None | ERR9119669 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1792004 | Other | La1.8.1 | None | SRR13861656 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR13861534 | Other | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16295804 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18910161 | Sensitive | lineage3 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692887 | Other | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR26399908 | Sensitive | lineage2.2.1.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675558 | HR-TB | None | SRR8380865 | Sensitive | lineage1.2.2.2 | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR5067606 | Sensitive | lineage2.2.1.1 | vn | ERR234246 | Sensitive | lineage2.2.1.1 | us | SRR5341456 | Other | None | ERR2513297 | Sensitive | lineage3.1.2 | None | ERR2693239 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341330 | HR-TB | None | SRR5535933 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045892 | Sensitive | None | ERR2660539 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6325442 | HR-TB | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR3077978 | Other | lineage1.1 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None |
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