Rv0668 - c.951C>G
Drug resistance types
36 Sensitive
8 RR-TB
82 HR-TB
35 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| 3 | |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9 | 62 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage2.2.1 | 17 |
| lineage1.1.1 | 1 |
| lineage4.5 | 2 |
| lineage2.2.1.2 | 3 |
| lineage4.1.1.3 | 4 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.9;lineage7 | 4 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| lineage4.8 | 2 |
| M.canetti;lineage4.9 | 3 |
| lineage6.1.1 | 2 |
| lineage3 | 8 |
| lineage4.3.2 | 1 |
| lineage3.1.2.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage6.1.3 | 1 |
| lineage2.2 | 1 |
| lineage2;lineage4 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.1.2.1 | 11 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 7 |
| M.canetti;lineage2.1;lineage3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.9;lineage9 | 3 |
| lineage4.4.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4 | 1 |
| M.canetti;lineage1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.6.2.2 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 232 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1640750 | Other | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675507 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR369151 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4816470 | HR-TB | lineage3 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR161037 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR10808730 | Other | lineage4.9 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4798823 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR752229 | Other | lineage4.5 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675487 | Other | M.canetti;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR5341330 | Other | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6046593 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4821053 | Other | lineage3 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR2660539 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR5917710 | Other | lineage4.1.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4821276 | Sensitive | lineage3 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4817692 | HR-TB | lineage1.1.2;lineage4 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6044835 | Other | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None |
|---|
