EBG00000313339 - n.1887A>T


Drug resistance types
44 Sensitive 10 RR-TB 89 HR-TB 28 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 111 Other
lineage Counts
lineage Count
lineage4.6.2.2 1
lineage4.9 147
La1.7;lineage4.9;lineage6 1
lineage4.5 2
lineage4.6.1.1 2
La1;lineage4.9 3
lineage4.3.3 2
lineage1.2.1.1 1
lineage4.8;lineage4.9 2
lineage2.2.1.1 2
lineage4.3.4.2 2
lineage3.1.2.1 2
lineage4.1.2 1
lineage4.2.2.2 1
lineage4.9;lineage7 4
lineage4.3.4.2.1 5
La1.7;lineage4.9;lineage7 3
lineage4.8 4
lineage4.1.1.3 2
lineage4.2.1 2
lineage5.2 2
lineage1.1.2 3
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
lineage2.2.1 15
lineage4.3.2.1 1
lineage2.2 3
La1.8.1 5
lineage4.1.2.1 8
La1.7.1;lineage4.9 1
lineage1.1.3.1 2
lineage4.3.1;lineage4.9;lineage6 1
lineage3;lineage4.9 1
lineage3 4
La1.2.BCG 1
lineage4.4.2 1
3
La3;M.canetti;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage4.9;lineage6.1.3 1
La3;lineage4.3.4 1
lineage4.3.4.1 5
lineage4.4.1.1 1
lineage4 1
lineage3;lineage4 1
La1.7;lineage4.9 6
lineage4.3.3;lineage4.9 1
La1.7.X-unk4 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9.1 1
lineage2.2.1.2 2
lineage4.4.1.2 1
La1.2 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.4.1.1.1 2
lineage4.3.4 1
La2;lineage2.2 1
La1.7.X-unk4;lineage4.9 1
La1.7.1 1
lineage4.1.1.1 1
lineage2.2;lineage4.9 1
La2;lineage4.9 1
lineage6.1.3 2
lineage2.1;lineage4.9 1
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage2.2.1.2;lineage7 1
La3;lineage4.9 1
lineage2.2.2 1
lineage2.2;lineage4 1
La1;lineage4.1.2 1
lineage2.2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 290
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786597 Other lineage4.6.2.2 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR6358979 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR5341330 Other lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR970441 RR-TB lineage2.2.1.1 None
SRR5535933 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR4815022 Other lineage3.1.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR926165 Other lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR3797015 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341400 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045548 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR323115 Sensitive lineage4.9 None
ERR4821962 Other lineage4.1.1.3 gb
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR5341310 Other lineage1.1.2 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4816548 HR-TB lineage4.5 None
ERR926158 Sensitive lineage4.9 None
ERR4821811 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1182878 Other lineage4.9 None
SRR1181264 Sensitive lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR5431730 Other La1.8.1 None
ERR1063858 HR-TB lineage4.9 None
SRR1181299 Other lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR19295647 HR-TB lineage4.9 None
SRR1183531 Other lineage4.9 None
ERR4820484 Sensitive lineage4.8 None
SRR5341455 Sensitive lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR1180047 Other lineage4.9 None
SRR1180687 Other lineage4.9 None
SRR1180087 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR473323 HR-TB lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1915487 Other La1.2.BCG None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
DRR188519 Other lineage4.4.2 None
SRR8692905 Sensitive None
ERR1063896 HR-TB None
SRR28351488 MDR-TB lineage2.2.1 None
ERR9786639 Sensitive lineage4.8 None
ERR4820798 Other lineage3.1.2.1 gb
ERR736872 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4815783 Other lineage4.1.2.1 gb
SRR1183438 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR10796633 Other lineage4.3.4.2 None
SRR7535082 Other lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR4817434 Other lineage3 None
SRR1183190 Other lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR176778 HR-TB lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR926160 Other lineage4.9 None
SRR1182900 Sensitive lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR11465151 Sensitive lineage4.3.4.1 None
SRR1180996 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR1035122 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR1173740 Other lineage3;lineage4 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR176779 HR-TB lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4816417 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3797081 Sensitive lineage4.9 None
SRR1173281 Other lineage3 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341293 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1181422 Other lineage4.9 None
SRR1180024 Other lineage4.9 None
SRR1183339 Other lineage4.9 None
SRR1181147 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR7851312 Other La1.2 None
SRR1183152 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1181580 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR161037 HR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR8692887 Other None
SRR28044873 Pre-XDR-TB lineage3 None
ERR245675 Sensitive lineage1.1.2 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4797264 HR-TB lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR11466070 Sensitive lineage4.3.4.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR702405 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR6866410 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR1183684 Other lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR926157 Other lineage4.9 None
SRR1182954 Other lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1180686 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
ERR4821655 HR-TB lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR7236177 Other La1.8.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR1063846 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR4814994 HR-TB lineage2.2.1 gb
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR323107 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR8692863 Other lineage2.2;lineage4 None
SRR1184308 RR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1181569 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR3283010 Sensitive La1.8.1 None
SRR6044875 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4769418 Other La1.2 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3283040 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR5341425 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR1023236 Other lineage6.1.3 None
ERR970413 MDR-TB lineage2.2.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR502510 HR-TB lineage4.9 None
ERR11465152 Sensitive lineage4.3.4.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1183281 Other lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
SRR1183170 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None