EBG00000313339 - n.1887A>T


Drug resistance types
93 Sensitive 6 RR-TB 67 HR-TB 23 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 104 Other
lineage Counts
lineage Count
lineage4.1.2.1 8
lineage1.2.1.1 1
lineage2.2.1.2 2
3
lineage2.2.1 16
lineage4.9 157
lineage4.3.3 2
lineage4.2.1 2
La1.7;lineage4.9 7
lineage1.1.2 3
lineage4.2.2.2 1
La1.2 2
lineage4.9;lineage7 4
lineage4.6.1.1 2
lineage4.3.4.1 5
lineage4.1.1.1 1
lineage4.8 5
lineage4.1.1.3 2
lineage1;lineage4.9 1
lineage4.3.4.2.1 5
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
La1;lineage2;lineage4.9 1
lineage4.4.2 1
La1.7.1;lineage4.9 1
lineage2.2 3
La1.7;lineage4.9;lineage7 3
lineage4.8;lineage4.9 2
La1.8.1 5
lineage4.5 2
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
lineage5.2 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.3.4.2 2
lineage2.1;lineage4.9 1
lineage3 4
La1.7;lineage3.1;lineage4 1
lineage4.3.2.1 1
lineage4 1
La1;lineage4.9 3
lineage1.1.3.1 2
lineage4.4.1.1.1 2
lineage4.3.3;lineage4.9 1
lineage3;lineage4.9 1
lineage2.2;lineage4 1
lineage2.2.1;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage3.1.2.1 2
lineage4.3.4 1
La1.7.1 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
lineage4.4.1.1 1
lineage2.2;lineage4.9 1
La2;lineage4.9 1
lineage6.1.3 2
La1.2;La1.8.1 1
lineage2.2.1.1 2
La1.7.X-unk4 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
lineage3;lineage4 1
La1;lineage4.1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.2.BCG 1
lineage2.2.2 1
lineage4.9;lineage6.1.3 1
La3;lineage4.9 1
lineage4.6.2.2 1
lineage2.2.1.2;lineage7 1
spoligotype Counts
spoligotype Count
None 302
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4818646 Sensitive lineage4.1.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR1175127 Other lineage2.2.1.2 None
ERR1063896 Sensitive None
ERR4814994 HR-TB lineage2.2.1 gb
SRR1180687 Other lineage4.9 None
SRR1183684 Other lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR6358979 Other lineage4.9 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR7851312 Other La1.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR11466070 Sensitive lineage4.3.4.1 None
SRR1183531 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR736848 Other lineage4.9 None
SRR1182954 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR4821962 Other lineage4.1.1.3 gb
ERR323045 HR-TB lineage1;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR212123 Other lineage4.9 None
SRR1180686 Other lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR4821655 HR-TB lineage4.9 None
SRR1173515 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4821811 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR161037 Other lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR6511621 Sensitive lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1196545 Sensitive lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
ERR13285191 Sensitive lineage4.9 None
ERR212138 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR9970979 Sensitive lineage4.8 None
ERR2660539 Other lineage4.9 None
SRR1180024 Other lineage4.9 None
SRR1183339 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797086 Sensitive lineage4.9 None
SRR1180047 Other lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
SRR11972367 Sensitive lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1183152 Other lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR9971112 Other lineage2.2.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR5341299 HR-TB lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
SRR8692905 Sensitive None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR13285192 Sensitive lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR323062 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR176651 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR323066 Sensitive lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR3283040 HR-TB lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR1159378 Other lineage4.9 None
SRR1181147 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR10796633 Other lineage4.3.4.2 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR4817434 Other lineage3 None
SRR14782054 Other lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
ERR502510 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1182878 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR11465151 Sensitive lineage4.3.4.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4816417 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181299 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR5341437 Sensitive lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
ERR323085 Sensitive lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR5341396 Other lineage3;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1183170 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR28351488 MDR-TB lineage2.2.1 None
ERR926156 Sensitive lineage4.9 None
SRR5431730 Other La1.8.1 None
ERR4797474 Sensitive lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
SRR1183438 Other lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR1181264 Sensitive lineage4.9 None
SRR1183190 Other lineage4.9 None
SRR1183281 Other lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR1173568 Sensitive lineage4.9 None
ERR4820798 Other lineage3.1.2.1 gb
SRR5341373 Other lineage4.9 None
ERR4815783 Other lineage4.1.2.1 gb
SRR6044875 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR4815022 Other lineage3.1.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR323107 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR5341366 Sensitive lineage4.9 None
SRR8692887 Other None
SRR7240033 Other La1.2;La1.8.1 None
ERR3797019 Other La1.8.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR11465152 Sensitive lineage4.3.4.1 None
ERR4816548 HR-TB lineage4.5 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR1182900 Sensitive lineage4.9 None
ERR970441 RR-TB lineage2.2.1.1 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR3283010 Sensitive La1.8.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1181569 Other lineage4.9 None
SRR1181580 Other lineage4.9 None
SRR6045158 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR4820484 Sensitive lineage4.8 None
SRR1173740 Other lineage3;lineage4 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1181422 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR3797046 HR-TB lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR1034634 HR-TB lineage4.9 None
SRR1180087 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1915487 Other La1.2.BCG None
SRR5341469 HR-TB lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR4797264 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR1180996 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR1183965 Sensitive lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR28044873 Pre-XDR-TB lineage3 None
SRR10808730 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769497 Other La1;lineage4.9 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR1173281 Other lineage3 None
ERR176778 HR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR7535082 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR926157 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR9786597 Other lineage4.6.2.2 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR736872 HR-TB lineage4.9 None