EBG00000313339 - n.1887A>T


Drug resistance types
85 Sensitive 22 RR-TB 89 HR-TB 26 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 111 Other
lineage Counts
lineage Count
lineage4.3.4.1 5
lineage4.9 46
lineage4.1.2.1 18
lineage4 73
lineage4.1.2 2
lineage4.3.3 4
lineage4.8 7
lineage4.3.2.1 1
lineage2.2.1 21
La1.2 3
lineage4.2.1 3
64
lineage4.4.1.2 1
lineage4.4.2 1
lineage4.3.4.2.1 9
lineage2.2 4
lineage4.3.4 3
lineage4.9;lineage1.1 1
lineage4.6.1.1 2
lineage3.1.2.1 3
La1 1
lineage4.1.1.3 2
La1.7.X-unk4 1
La1.8.1 3
lineage4;lineage3.1 1
lineage4.9;La1.3 1
lineage1.1.2 3
lineage2.2.1.2 3
lineage4.4.1.1 5
lineage4.5 2
lineage5.1.1 1
lineage4.3 1
lineage1.1.3.1 4
lineage1.2.2.2 1
lineage3 15
lineage5.2 2
lineage4.6.2.2 2
lineage2.2.1.1 3
lineage4.3.4.2 2
lineage6.1.3 1
lineage2.2.2 1
lineage4.2.2.1 1
La1.7.1 1
lineage7;lineage2.2.1.2 1
lineage1.1.1 1
lineage4;lineage2.2 2
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage2.1 3
lineage4.1 3
lineage4.1.1 1
lineage1.2.1.1 1
lineage3.1 1
lineage3.1.3 1
lineage4.4 1
lineage1.1.3.3 1
lineage3.1.1 1
lineage4.6.5 1
lineage4.9.1 1
spoligotype Counts
spoligotype Count
None 348
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11465151 Sensitive lineage4.3.4.1 None
SRR9940972 Other lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR11465152 Sensitive lineage4.3.4.1 None
SRR7535082 Sensitive lineage4 None
SRR9970980 Other lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR7851312 Other La1.2 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR323045 HR-TB None
ERR323107 Other lineage4 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323085 Sensitive lineage4 None
DRR188519 Other lineage4.4.2 None
ERR323066 Sensitive lineage4 None
ERR323108 HR-TB lineage4 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR1063896 Sensitive None
ERR067699 HR-TB lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR1063858 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1035122 Sensitive None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063862 HR-TB None
ERR1063859 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796565 RR-TB lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR108471 HR-TB lineage4 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR4820798 Other lineage3.1.2.1 gb
ERR137286 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3283025 HR-TB None
ERR3283008 Other lineage4.9 None
ERR3283010 Other La1 None
ERR3283021 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283030 HR-TB lineage4.9 None
ERR3283055 HR-TB None
ERR3283040 HR-TB None
ERR3283032 HR-TB None
ERR4821962 Other lineage4.1.1.3 gb
ERR3445504 HR-TB None
ERR3445487 Other La1.7.X-unk4 None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3797015 HR-TB None
ERR3445503 HR-TB None
ERR3797019 Other La1.8.1 None
ERR4024991 Other None
ERR3797047 HR-TB lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3797046 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797081 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR387051 HR-TB None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR473323 HR-TB lineage4.9 None
ERR4188247 HR-TB None
ERR4769452 HR-TB None
ERR473332 Other lineage4 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769457 Other lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4769450 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4769521 HR-TB None
ERR4769508 RR-TB lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4796929 Sensitive lineage4 None
ERR4796254 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4798099 Other None
ERR4799378 Sensitive lineage4 None
ERR4799025 Pre-XDR-TB None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4808964 RR-TB lineage2.2.1 None
ERR4811493 HR-TB None
ERR5987263 MDR-TB lineage2.2.1 None
ERR736848 HR-TB None
ERR6358979 Other None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6866807 HR-TB lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736834 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR752229 Other lineage4.5 None
ERR736872 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR751326 Sensitive lineage4 None
ERR751345 Other lineage5.1.1 None
ERR9117760 HR-TB lineage4.3 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9119669 HR-TB None
ERR9117827 Other lineage1.2.2.2 None
ERR9117788 Other lineage3 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR970413 MDR-TB lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786639 Sensitive lineage4.8 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR10315567 Other lineage2.2.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1158918 Sensitive lineage4 None
ERR9787256 Other lineage6.1.3 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1173777 Other lineage4 None
SRR1173385 Sensitive lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173740 Other None
SRR1173281 RR-TB lineage3 None
SRR1173515 HR-TB lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1180252 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1183965 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1184308 Sensitive lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR14782405 HR-TB None
SRR16149133 MDR-TB lineage4.2.2.1 None
SRR14801749 Sensitive None
SRR14802079 MDR-TB lineage4.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR1791747 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR16156804 RR-TB lineage4.9 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR19295647 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR21658550 Other lineage1.1.1 None
SRR22048374 Sensitive lineage4.8 None
SRR8692790 RR-TB lineage4 None
SRR22424765 MDR-TB lineage4 None
SRR8692893 Other lineage4.9 None
SRR8692775 Other lineage4.9 None
SRR8692897 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692782 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692855 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR8692853 Sensitive lineage4.9 None
SRR8692887 Other None
SRR8692888 Other lineage4.9 None
ERR176779 HR-TB None
ERR176778 HR-TB None
ERR4815193 MDR-TB lineage4.8 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR4815310 Other None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR702405 Sensitive lineage2.1 None
ERR181824 HR-TB lineage4 None
ERR4815502 Other lineage4.1 None
ERR181744 HR-TB None
ERR4814709 Other lineage4.1.1 None
SRR3675246 Sensitive lineage4 None
SRR3675270 HR-TB None
ERR176651 HR-TB None
ERR4815550 Other lineage4 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR4814986 Other lineage4.3.4.2 None
ERR4816001 Other lineage3 None
ERR181887 HR-TB None
SRR3675456 HR-TB None
ERR4815022 Other lineage3.1.2.1 None
ERR4817055 Other lineage4.1.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
SRR5341422 HR-TB lineage2.1 None
SRR3675555 HR-TB None
ERR4816417 Other lineage4.9 None
ERR212123 Other None
ERR212125 HR-TB lineage4 None
ERR2229198 MDR-TB lineage4.8 None
ERR4816464 Other lineage3 None
ERR212138 HR-TB lineage4 None
ERR2229197 Sensitive lineage4 None
ERR4817109 Other lineage3 None
ERR4816548 MDR-TB lineage4.5 None
SRR5341384 Sensitive lineage4.9 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816734 Sensitive lineage4.9 None
ERR4816755 Other lineage4.1.1.3 None
ERR4816782 Other lineage4.1.2.1 None
ERR4817434 Other lineage3 None
ERR4816610 RR-TB lineage4.3.3 None
ERR245675 Sensitive lineage1.1.2 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818110 Sensitive lineage4.9 None
ERR4818831 Other lineage3 None
ERR4819073 Other lineage4.1.2.1 None
ERR2446566 Other lineage4.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4819096 Other lineage4.4.1.1 None
ERR4819051 Other lineage4 None
ERR4817584 MDR-TB lineage3 None
SRR5341453 Sensitive None
SRR5341366 Sensitive lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5341387 Other lineage4 None
ERR4820723 RR-TB lineage4.4.1.1 None
SRR5341396 Other lineage4 None
ERR4819555 Other lineage4.8 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4820324 Other lineage4 None
SRR5341425 Other lineage4 None
SRR5341432 HR-TB lineage4 None
ERR4819622 Other lineage4.1.2.1 None
SRR5341456 Other None
SRR5341437 Sensitive lineage4.9 None
ERR4820484 Other lineage4.8 None
ERR4819772 RR-TB lineage1.1.3.1 None
SRR5341298 Sensitive lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341300 Other lineage4 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
SRR5341303 RR-TB lineage4 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR5341306 Pre-XDR-TB lineage4.4 None
ERR4820817 Other lineage4.1.2.1 None
SRR5341308 Sensitive lineage4 None
SRR5341315 Sensitive None
SRR5341313 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820019 Other lineage4.3.4.2.1 None
SRR5341330 HR-TB None
SRR5341310 Other lineage1.1.2 None
ERR6359082 Other lineage4.9 None
SRR5341467 Other lineage4 None
ERR4821769 Other lineage4.1.2.1 None
SRR5341461 Sensitive lineage4 None
ERR2693238 HR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR4821791 HR-TB lineage4.1.2.1 None
ERR4821811 RR-TB lineage4.9 None
SRR6045485 Other lineage4.9 None
SRR5535933 HR-TB None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341469 Other lineage4 None
SRR5431730 Other La1.8.1 None
SRR6046117 RR-TB lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR4821360 Other lineage4.1.2.1 None
ERR4822138 Other lineage4.1.2.1 None
SRR6044817 Other lineage3 None
ERR4821655 Sensitive lineage4 None
SRR6045892 Sensitive None
ERR4822261 RR-TB lineage2.2.1 None
SRR6045664 Other lineage4.2.1 None
SRR6046210 Other lineage4 None
SRR6044784 MDR-TB lineage3 None
SRR6044835 Sensitive lineage4 None
SRR6046253 HR-TB lineage4.9 None
SRR6045944 Other lineage4.1.2.1 None
SRR6045010 Other lineage4 None
SRR6045053 Other None
SRR6046020 Other lineage3 None
SRR6046046 Other None
SRR6045267 RR-TB lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045158 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045312 Other lineage1.1.3.3 None
SRR6046250 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6046299 HR-TB None
SRR6046815 Other lineage3 None
SRR6046442 Other lineage3 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046492 Other None
SRR6046766 Other lineage3.1.1 None
SRR6046848 Other lineage4.6.5 None
ERR11466070 Sensitive lineage4.3.4.1 None
SRR6511621 HR-TB None
SRR6046852 MDR-TB lineage3 None
SRR6046878 HR-TB lineage4 None
ERR11466062 Sensitive lineage4.9.1 None
ERR502470 RR-TB lineage4.9 None
ERR4814994 HR-TB lineage2.2.1 gb
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831117 HR-TB None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR6832644 Other lineage4.3.3 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831792 MDR-TB lineage4;lineage2.2 None
SRR6982246 Sensitive lineage4 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR502510 Sensitive lineage4 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR4815783 Other lineage4.1.2.1 gb
ERR11465510 Sensitive lineage4.3.4.2.1 None