EBG00000313339 - n.113T>G


Drug resistance types
106 Sensitive 11 RR-TB 111 HR-TB 33 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 134 Other
lineage Counts
lineage Count
lineage4.9 223
lineage4.1.2.1 8
La1.3 4
lineage4.3.2.1 4
lineage2.2.1 22
La1.7;lineage4.9 8
La3;lineage4.9 8
lineage4.2;lineage4.6.3;lineage4.9 1
La1;lineage4.1.2 1
lineage4.9;lineage7 3
lineage2.2.1;lineage4.9 2
lineage4.3.4.2 1
lineage4.1;lineage4.9 1
lineage4.4.1.2 1
lineage4.3.3 4
lineage3 9
lineage2.2 4
lineage4.3.4.2.1 6
lineage4.1.1.3 6
lineage4.8 5
lineage4 4
2
lineage4.6.2.2 1
lineage4.5 1
lineage2.2.1.2 3
lineage4.3.4.1 2
lineage4.8;lineage4.9 2
La1.2 2
lineage6.1.3 3
lineage4.6.1.2 2
La1.7.1 1
lineage4.1.2 1
La1.8.1 2
lineage3.1.2.1 2
La1;lineage2;lineage4.9 1
lineage2.2.1.1 3
lineage2.1;lineage4.9 2
lineage1;lineage4.9 1
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
lineage1.2.2.2 1
lineage1.1.2 3
lineage2.2;lineage4 1
La1.7.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9;lineage9 1
lineage5.1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage2;lineage4 1
La3;lineage4 1
lineage1.1.3.1 1
La1;lineage4.9 4
lineage2.1;lineage4.9;lineage7 1
lineage3.1.3 1
lineage4.4.1.1.1 1
La1.7.X-unk4;lineage4.9 1
lineage4.8.1 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
La1.7;lineage4.9;lineage7 3
lineage4.2.1 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.3.3;lineage4.9 1
lineage5.2 2
lineage4.2;lineage4.6.3;lineage4.9.1 1
La1.2.BCG 1
lineage4.7 1
lineage4.4.2 1
M.canetti;lineage4.9;lineage9 1
La1.7;lineage4.9;lineage6 1
lineage4.1.1.1 1
lineage4.3.4 1
La2;lineage2.2 1
La3;M.canetti;lineage4.9 1
La2;lineage4.9 1
lineage2.2.1;lineage4 1
La1.7;lineage3.1;lineage4 1
lineage2.2.2 1
lineage2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 407
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4769552 Sensitive La1.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR9971112 HR-TB lineage2.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797086 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR4769452 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4769555 Sensitive La1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR212125 HR-TB lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR6359082 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR2100532 Sensitive lineage3 None
SRR6045503 Other lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR1180410 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
ERR736856 HR-TB lineage4.9 None
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
ERR363446 Other lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR363456 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
SRR8692887 Other None
ERR1063896 HR-TB None
ERR9786597 Other lineage4.6.2.2 None
ERR349300 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR1181368 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR20632814 Sensitive lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4769427 Other La1.2 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR4769408 Other La1.3 None
ERR363421 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
SRR1181256 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR363474 Sensitive lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR20969731 Other lineage2.2.1 None
ERR369163 Other lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR228175 Sensitive lineage3 None
ERR2446509 Other lineage3 nl
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR970443 RR-TB lineage2.2.1.1 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR6855695 Sensitive lineage4.8 None
ERR3283032 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3283011 Other La3;lineage4.9 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR349264 Other lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR3275190 Other lineage3 nl
ERR363498 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR5341387 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR181744 HR-TB La3;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR8692863 Other lineage2.2;lineage4 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1175512 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
SRR5341425 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR970413 MDR-TB lineage2.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR7851312 Other La1.2 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR363500 Other lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR369162 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR5341373 Other lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR867566 Other lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR5341330 Other lineage4.9 None
ERR9786276 Sensitive lineage4.8 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR369157 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR2024953 MDR-TB lineage2.2.1 cn
ERR4815022 Other lineage3.1.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR926165 Other lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR6866410 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR387051 RR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR1175487 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR1063883 HR-TB lineage4.9 None
ERR4769514 Other La1.3 None
SRR1183965 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR5341310 Other lineage1.1.2 None
SRR1181349 Sensitive lineage4 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
SRR10315567 HR-TB lineage2.2.1 None
SRR3675582 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1172807 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176779 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR1172885 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4596910 Sensitive lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
SRR8692812 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR867540 MDR-TB lineage2.2.1 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR363490 Other lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR369160 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR1180444 Sensitive lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR363453 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR5341467 Other lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR1023236 Other lineage6.1.3 None
ERR4769450 Other lineage4.9 None
SRR1167271 MDR-TB lineage4.1.1.3 None
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341299 HR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR161037 HR-TB lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR4769442 Sensitive lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR6046611 Sensitive lineage4.9 None
ERR363449 Other lineage4.9 None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
SRR1180300 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR1180345 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9786076 Other lineage3 None
SRR5535933 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR926156 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR3275709 HR-TB lineage3 nl
ERR9787256 Other lineage6.1.3 None
ERR4769439 HR-TB lineage4.9 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR3283030 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR4821655 HR-TB lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4769457 Other lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR7496471 Sensitive lineage4 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None