Rv0006 - c.534A>C
Drug resistance types
43 Sensitive
2 RR-TB
81 HR-TB
12 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 23 |
| lineage4.7 | 1 |
| 92 | |
| lineage4.3.4.1 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.9 | 38 |
| lineage2 | 4 |
| La1.2 | 1 |
| lineage5.2 | 2 |
| lineage4.5 | 1 |
| lineage2.2 | 7 |
| lineage3 | 1 |
| La3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1 | 11 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.2.1 | 1 |
| La1.7.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3 | 1 |
| lineage4.1 | 1 |
| lineage2.1 | 1 |
| lineage4.8 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.9.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 213 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR133825 | Sensitive | lineage4 | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR323108 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283031 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3797044 | Other | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR4811493 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR4811142 | MDR-TB | None | ERR736839 | Other | None | ERR736874 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786843 | Other | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | ERR990545 | Other | lineage3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172728 | MDR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172817 | HR-TB | None | SRR1173629 | Other | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR14782405 | HR-TB | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675502 | Other | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR158583 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675550 | Other | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR212033 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212123 | Other | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4817735 | Other | lineage4.8 | None | ERR1035162 | Other | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | SRR5341418 | Other | None | SRR5341456 | Other | None | SRR5341373 | HR-TB | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341302 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR2693254 | Other | None | SRR5341330 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2693230 | Other | None | SRR6045526 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046299 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046397 | Other | None | SRR6046492 | Other | None | SRR6046482 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6789626 | Other | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR502889 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR11466061 | Sensitive | lineage4.9.1 | None |
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