lineage | Count |
---|---|
lineage4.9;lineage4.1 | 1 |
lineage2.2 | 2 |
lineage4.4.2 | 1 |
13 | |
lineage4.9 | 8 |
lineage4.3.3 | 1 |
La1 | 1 |
lineage4.6.1.1 | 3 |
lineage4 | 7 |
lineage4;lineage3.1 | 1 |
lineage2.2.1 | 3 |
lineage2.2.1.2 | 2 |
lineage4.8 | 10 |
lineage4.3.4 | 1 |
lineage4.1.1.3 | 1 |
lineage3 | 1 |
lineage1.1.1 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063857 | HR-TB | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR3283010 | Other | La1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796615 | Other | lineage4 | None | ERR10796634 | Other | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR387051 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769521 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR736856 | HR-TB | lineage4 | None | SRR15368782 | Sensitive | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1173833 | Other | lineage4.9 | None | ERR9119669 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR2229366 | Other | lineage4.8 | None | SRR3675456 | HR-TB | None | SAMEA3501015 | Other | lineage4.8 | None | SRR3675555 | HR-TB | None | ERR212034 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR3275709 | HR-TB | lineage3 | nl | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR1035138 | MDR-TB | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5535933 | HR-TB | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR6046046 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4814563 | Sensitive | lineage2.2.1 | gb | ERR4815816 | Other | lineage4.5 | gb | SRR6046737 | Other | lineage4.9 | None |
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