EBG00000313339 - n.981C>A
Drug resistance types
27 Sensitive
2 RR-TB
30 HR-TB
2 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 12 |
| 21 | |
| lineage4.9 | 19 |
| La1.3 | 4 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage2.2 | 3 |
| lineage2.2.1 | 4 |
| lineage4.5 | 1 |
| lineage4.8 | 4 |
| lineage3 | 8 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1.2 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.3 | 2 |
| La1.8.1 | 3 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 97 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769427 | Other | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769548 | Other | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4769552 | Other | La1.3 | None | ERR4811493 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR5865400 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR2100532 | Sensitive | lineage3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR2100537 | Sensitive | lineage3 | None | ERR4817035 | Sensitive | lineage4.8 | gb | ERR4815471 | Other | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR228175 | Sensitive | lineage3 | None | ERR4817998 | Other | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR228180 | Sensitive | lineage3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819357 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | None | SRR5341456 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR2516830 | Sensitive | lineage3 | gb | ERR2515230 | Sensitive | lineage4.8 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR5535933 | HR-TB | None | SRR5431730 | Other | La1.8.1 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | ERR4829373 | MDR-TB | lineage4.3.4.2 | it | ERR037504 | Other | lineage4.9.1 | None | SRR6046492 | Other | None | DRR188519 | Other | lineage4.4.2 | None | ERR4831117 | HR-TB | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR8600117 | Other | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR3283055 | HR-TB | None | ERR349330 | Sensitive | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349296 | Sensitive | lineage4 | None |
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