Rv2754c - p.Lys53Arg

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
12 Sensitive 4 RR-TB 20 HR-TB 10 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 34 Other
lineage Counts
lineage Count
La3;lineage4.9 3
lineage2.2.1 3
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La2;lineage4.9 1
lineage4.9 33
lineage4.3.4.2.1 1
lineage4 3
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage4.9 3
lineage2.2.1.2 2
lineage4.3.4.1 1
La1.7;lineage4.9 5
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1.1 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage3.1;lineage9 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.7 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage7 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.7;M.canetti;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage2.1;lineage4.9 1
1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.1.2 2
spoligotype Counts
spoligotype Count
None 82
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11252612 Other La3;lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3273109 HR-TB lineage4 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR176751 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR28351339 MDR-TB lineage4 None
ERR181824 HR-TB lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR502511 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR6045053 Other lineage4 None
SRR6046046 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4830353 Other La1.7 None
SRR1169249 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR4810624 HR-TB lineage2.2.1 None
ERR124636 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212138 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR6359082 Other lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR6866807 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3283040 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR1063896 Sensitive None
SRR5535933 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR29050859 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970980 Other lineage4.1.2 None
SRR26331611 Sensitive lineage4.9 None