Rv0682 - c.99A>G


Drug resistance types
146 Sensitive 20 RR-TB 148 HR-TB 17 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 106 Other
lineage Counts
lineage Count
lineage4 123
113
lineage4.9 90
lineage2.2.1.2 3
lineage4.9;lineage2.2 1
lineage2.2 6
lineage2 1
lineage4.4.1.1.1 1
lineage2.2.1 24
lineage4.2.1 3
La1.7.1 1
lineage3 8
La1.8.1 3
lineage7;lineage2.2.1.2 1
lineage2.2.2 1
lineage4;lineage2.2 1
lineage4.2;La1.7 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4 2
lineage1.2.1.1 1
lineage2.1 2
lineage4.8 6
lineage4.6.3 1
lineage4.1.2.1 7
lineage4.1 2
lineage1.1.2 3
lineage4.1.1.2 1
lineage4.4.1.1 1
lineage4.3.4.2.1 5
lineage4.3.3 1
lineage4.3.2 1
lineage3.1.1 1
lineage4.6.2.2 1
lineage4.9;lineage2.1 1
lineage5 1
lineage2.2.1.1 1
lineage4.2.1.1 1
lineage4.3.4.1 2
lineage4.3.2.1 2
lineage4.7 1
lineage4.8.1 1
La2 1
lineage4.1.2 2
lineage4.4.1.2 1
lineage4.9.1 1
lineage4.4.1.1;lineage1.2.2.1 1
La1 2
lineage4.3.4.1;La1.7 1
lineage5.1.2 1
lineage4;lineage3.1 1
lineage4.9;La1.3 2
La1.2 1
La1.3 2
lineage3.1.2 1
lineage4.5 1
lineage1.1.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
spoligotype Counts
spoligotype Count
None 447
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173777 Other lineage4 None
SRR1174897 HR-TB None
SRR1175506 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175491 MDR-TB lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1181283 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1183054 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR14801749 Sensitive None
SRR1184021 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR14782405 HR-TB None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR17658565 Other lineage3 None
SRR1791747 Other La1.8.1 None
SRR16157123 Other lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20970016 Other lineage2.2 None
SRR20969708 HR-TB lineage2.2 None
SRR20632814 Sensitive lineage4 None
SRR20969731 Other lineage2.2.1 None
SRR8692782 Other lineage4.9 None
ERR8025734 Pre-XDR-TB lineage2.2.2 None
SRR8692905 HR-TB None
SRR8692885 Other lineage4.9 None
ERR176779 HR-TB None
SRR8692824 Other lineage4.9 None
SRR8692887 Other None
ERR176778 HR-TB None
SRR8692800 Other lineage4 None
SRR8692863 Other lineage4;lineage2.2 None
SRR23961559 Other lineage4.2;La1.7 None
ERR181744 HR-TB None
ERR158583 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675488 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
SRR3675209 Sensitive lineage4.9 None
ERR4815471 Other lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675222 Other None
SRR3675501 HR-TB None
ERR702405 Sensitive lineage2.1 None
SRR3675280 HR-TB lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675270 HR-TB None
ERR181824 HR-TB lineage4 None
SRR3675246 Sensitive lineage4 None
SRR3675284 HR-TB lineage4.9 None
SRR3675292 Sensitive lineage4 None
SRR3675312 HR-TB lineage4 None
ERR176651 HR-TB None
ERR4815551 Other lineage2.2.1 None
ERR212034 HR-TB None
ERR181887 HR-TB None
ERR176740 HR-TB None
SRR3675527 RR-TB lineage4.9 None
SRR5341422 HR-TB lineage2.1 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675456 HR-TB None
SRR3675502 Other None
ERR4816964 Other lineage4.9 None
ERR4816151 Other lineage4.8 None
SRR3675550 Other None
ERR212123 Other None
SRR3675555 HR-TB None
ERR4817368 Other lineage4.6.3 None
ERR212125 HR-TB lineage4 None
ERR4816470 Other lineage3 None
SRR3675574 HR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR212138 HR-TB lineage4 None
ERR216965 HR-TB lineage4.9 None
ERR2228890 Other lineage4 None
ERR2228810 RR-TB lineage4 None
ERR4816656 HR-TB None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR2229810 Other lineage4.8 None
ERR2446566 Other lineage4.1 None
ERR4818110 Sensitive lineage4.9 None
ERR1035162 Other None
ERR245675 Sensitive lineage1.1.2 None
ERR4818252 Other lineage4.1.1.2 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818536 Other lineage4.9 None
ERR4819051 Other lineage4 None
ERR4818929 HR-TB None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341453 Sensitive None
ERR4818561 HR-TB lineage4 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5341373 HR-TB lineage4 None
ERR4819357 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341387 Other lineage4 None
SRR5341396 Other lineage4 None
ERR4819305 RR-TB lineage4.9 None
SRR5341400 HR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341418 Other None
SRR5341425 Other lineage4 None
ERR4819462 Other lineage4 None
ERR1035138 MDR-TB None
ERR4819513 Other lineage4.3.2 None
ERR4819546 HR-TB lineage3 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819623 Sensitive lineage4.9 None
SRR5341456 Other None
SRR5341432 HR-TB lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341293 HR-TB lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
ERR2514692 Other None
ERR4819863 RR-TB lineage4.9 None
SRR5341303 RR-TB lineage4 None
ERR4819933 Other lineage4.9 None
SRR5341308 Sensitive lineage4 None
ERR2514821 Other lineage2.2.1 None
SRR5341313 HR-TB None
ERR4820833 HR-TB None
SRR5341315 Sensitive None
SRR5341310 Other lineage1.1.2 None
SRR5341366 Sensitive lineage4 None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341469 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR5341470 HR-TB None
SRR6046210 Other lineage4 None
SRR6045503 HR-TB None
ERR4821143 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR5535933 HR-TB None
SRR6045526 HR-TB None
SRR6045519 HR-TB None
ERR2660539 Other lineage4.9 None
ERR4821214 RR-TB None
ERR4822186 Sensitive lineage4.9 None
ERR4821550 Other lineage2.2.1 None
ERR4821310 Other lineage5 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821655 Sensitive lineage4 None
SRR6045664 Other lineage4.2.1 None
ERR2693227 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6046141 Other lineage4.9 None
SRR6045706 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044780 Other lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6045053 Other None
SRR6045002 MDR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6046046 Other None
SRR6045191 Sensitive lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045327 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046250 Other lineage4.9 None
SRR6046225 HR-TB None
SRR6046259 Sensitive lineage4.9 None
SRR6046299 HR-TB None
SRR6046482 HR-TB None
SRR6046362 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
ERR4830353 Other None
SRR6046460 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046492 Other None
ERR323037 HR-TB lineage4 None
SRR6046839 Other lineage4.9 None
SRR6511621 HR-TB None
SRR6046802 Other lineage4 None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6046897 Sensitive lineage4 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR4831117 HR-TB None
SRR6982196 Sensitive None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6832787 RR-TB lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR323039 HR-TB None
ERR502510 Sensitive lineage4 None
ERR502889 Other None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR7535082 Sensitive lineage4 None
SRR9970979 Sensitive lineage4.8 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR502524 HR-TB La2 None
SRR8217918 HR-TB None
SRR9970980 Other lineage4.1.2 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323045 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323053 HR-TB None
ERR323108 HR-TB lineage4 None
ERR323066 Sensitive lineage4 None
ERR017781 Other lineage3 None
ERR323085 Sensitive lineage4 None
ERR11465189 RR-TB lineage4.9.1 None
ERR067681 HR-TB None
ERR323107 Other lineage4 None
ERR067699 HR-TB lineage4 None
ERR1063862 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1035122 Sensitive None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063855 Other lineage4 None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR1063896 Sensitive None
ERR1063883 Sensitive lineage4 None
ERR108471 HR-TB lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR323115 Sensitive lineage4 None
ERR133986 HR-TB None
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR11465714 Other lineage4.4.1.1;lineage1.2.2.1 None
ERR3283010 Other La1 None
ERR3273109 MDR-TB lineage4 None
ERR11465802 Other lineage4.3.4.1;La1.7 None
ERR3283025 HR-TB None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283028 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283047 HR-TB None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3283055 HR-TB None
ERR3445504 HR-TB None
ERR3439432 Other None
ERR3445501 HR-TB None
ERR3445503 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR349298 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR3468488 RR-TB La1.8.1 None
ERR349264 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR3797046 HR-TB None
ERR373946 Sensitive lineage4 None
ERR3797015 HR-TB None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797047 HR-TB lineage4 None
ERR3797062 RR-TB lineage4.9 None
ERR3797048 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797060 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797063 HR-TB None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR3797081 Sensitive lineage4 None
ERR387051 HR-TB None
ERR3797087 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400538 RR-TB lineage5.1.2 None
ERR400529 Other lineage3 None
ERR4024991 Other None
ERR403298 HR-TB lineage4 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188247 HR-TB None
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR4769450 HR-TB None
ERR473323 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR4769442 HR-TB lineage4 None
ERR4769446 Sensitive lineage4.9;La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769521 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4769497 HR-TB La1.2 None
ERR4769516 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4796577 MDR-TB None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797193 HR-TB lineage1.1.2 None
ERR4798431 HR-TB None
ERR4797474 Other None
ERR4798099 Other None
ERR4798262 HR-TB La1 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798406 HR-TB None
ERR4798504 Other lineage3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4799025 Pre-XDR-TB None
ERR4798823 HR-TB lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799378 Sensitive lineage4 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799513 HR-TB lineage2.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811493 HR-TB None
ERR4810624 HR-TB lineage2.2 None
ERR6359070 Other lineage4.9 None
ERR6358951 HR-TB lineage4 None
ERR6359066 HR-TB lineage4 None
ERR6358979 Other None
ERR6866547 Sensitive lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866022 Other None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866410 Sensitive None
ERR6359069 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6866639 Other None
ERR6866807 HR-TB lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR736834 Sensitive lineage4 None
ERR736831 HR-TB lineage4.9 None
ERR751326 Sensitive lineage4 None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736865 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR9634265 Sensitive None
ERR752229 Other lineage4.5 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9119669 HR-TB None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10808399 Sensitive lineage4 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1062919 HR-TB lineage2.2.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR987722 HR-TB None
SRR10809074 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR1172310 HR-TB None
SRR1158918 Sensitive lineage4 None
SRR1172214 HR-TB lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172717 Other lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1172807 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173568 Other lineage4.9 None