lineage | Count |
---|---|
124 | |
lineage4 | 9 |
lineage4.3.2 | 1 |
lineage2.2 | 4 |
lineage2.2.1.2 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2.1 | 2 |
lineage4.9;La3 | 1 |
lineage2.2.1;La3 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.9 | 3 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.4 | 1 |
lineage4.3 | 1 |
lineage4.8 | 2 |
La1.8.1 | 1 |
lineage3.1 | 2 |
La1.2 | 1 |
lineage2 | 1 |
lineage3 | 2 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 165 |
ID | Drug resistance | Lineage | Country iso2 | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | ERR6866639 | Other | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | SRR10809074 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR1169306 | Other | None | SRR1169194 | Other | None | SRR12142341 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173629 | Other | None | SRR1184380 | HR-TB | None | SRR1173400 | Other | None | SRR1173778 | Other | None | SRR19304036 | HR-TB | None | SRR12416824 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR22048373 | Sensitive | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR25827682 | Other | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR6325445 | HR-TB | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR161033 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675234 | Other | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675558 | HR-TB | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675311 | Other | None | SRR3675510 | Other | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR212123 | Other | None | ERR4816466 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4816656 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR212121 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | SRR5341333 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341456 | Other | None | SRR5341315 | Sensitive | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6045503 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6046133 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045952 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045053 | Other | None | SRR6046225 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | ERR294248 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6789626 | Other | None | ERR323038 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR3283024 | Other | None | ERR3283017 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4811022 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR5336148 | Other | None | ERR4811105 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4811142 | MDR-TB | None |
---|