EBG00000313339 - n.165A>G
Drug resistance types
11 Sensitive
5 RR-TB
19 HR-TB
15 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 33 |
| lineage2.2.1 | 7 |
| lineage4.3.3 | 1 |
| lineage3 | 3 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2 | 4 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage1 | 1 |
| La3;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage4.7 | 1 |
| lineage4 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La2;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.2.1.2 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 77 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045217 | Other | lineage4.9 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR14782054 | Other | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | SRR20970016 | Other | lineage2.2 | None | DRR188519 | Other | lineage4.4.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | SRR5535933 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR161037 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR2513259 | Other | lineage3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Other | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR3675582 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR867566 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None |
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