Rv0006 - c.1404C>T
Drug resistance types
20 Sensitive
2 RR-TB
13 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 25 |
| La1.7;lineage4.9 | 6 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1 | 11 |
| lineage4.3.2.1 | 1 |
| lineage4 | 2 |
| lineage4.2.1 | 1 |
| lineage2.2.1.2 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2 | 2 |
| 1 | |
| lineage4.3 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.8 | 2 |
| lineage4.1.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 70 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5535933 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR7911681 | Sensitive | lineage4.1 | za | ERR1063846 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR6982226 | Sensitive | lineage4.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR9786843 | Other | None | SRR10808730 | Other | lineage4.9 | None | ERR11050712 | Sensitive | lineage4.3 | None | SRR6045555 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675222 | Other | La1.7 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6982556 | Sensitive | lineage4.1 | None | ERR245758 | Other | lineage4.9.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR11050689 | Sensitive | lineage4.3 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR11252426 | Sensitive | lineage4.1 | None | ERR7911470 | Sensitive | lineage4.1 | za | SRR6046594 | Sensitive | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR2101661 | Sensitive | lineage4.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR4808949 | Sensitive | lineage4.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6045053 | Other | lineage4 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR1034926 | Sensitive | lineage4.1 | za | SRR3675235 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR3725688 | Sensitive | lineage4.1 | None | ERR7911451 | Sensitive | lineage4.1 | za | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR2101811 | Sensitive | lineage4.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1175127 | Other | lineage2.2.1.2 | None |
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