Rv0006 - c.1404C>T


Drug resistance types
20 Sensitive 2 RR-TB 13 HR-TB 3 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 32 Other
lineage Counts
lineage Count
lineage4.9 25
lineage4.1 11
lineage4.2.1 1
lineage2.2 2
lineage4.1;lineage4.8 1
lineage2.1;lineage4.9;lineage6.3 1
La1.7 1
La1.7;lineage4.9 6
lineage2.1;lineage4.9 1
lineage4.8 2
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2.1 1
M.canetti;lineage4.9 2
La1.7;M.canetti;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.2.1.2 2
M.canetti;lineage4.9;lineage9 1
lineage4.1.2 1
lineage4.3 2
lineage4 2
1
La1;lineage4.9 1
lineage4.9.1 1
lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 70
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6511621 Sensitive lineage4.9 None
SRR3725688 Sensitive lineage4.1 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4816466 HR-TB lineage4.9 None
ERR11252426 Sensitive lineage4.1 None
ERR7911470 Sensitive lineage4.1 za
SRR3675441 Other lineage4.9 None
SRR6982226 Sensitive lineage4.1 None
SRR6046485 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675222 Other La1.7 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
SRR6045347 Other lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR8217918 HR-TB lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR2101811 Sensitive lineage4.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR2514327 HR-TB lineage4.8 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR6046046 Other lineage4.9 None
ERR11050689 Sensitive lineage4.3 None
ERR2446566 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR7911451 Sensitive lineage4.1 za
SRR12416842 HR-TB lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4769452 Other lineage4.9 None
SRR2101661 Sensitive lineage4.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
ERR4808949 Sensitive lineage4.1 None
SRR10808730 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR11050712 Sensitive lineage4.3 None
SRR6045555 Other lineage4.9 None
SRR6982556 Sensitive lineage4.1 None
ERR245758 Other lineage4.9.1 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
SRR3675492 Other La1.7;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR1034926 Sensitive lineage4.1 za
ERR7911681 Sensitive lineage4.1 za
ERR4769450 Other lineage4.9 None
ERR161037 Other lineage4.9 None