EBG00000313325 - n.87A>G


Drug resistance types
59 Sensitive 29 RR-TB 79 HR-TB 35 MDR-TB 11 Pre-XDR-TB 1 XDR-TB 153 Other
lineage Counts
lineage Count
La3;lineage2.2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.8 28
lineage4.9 145
La1.2.BCG 3
lineage2.2 5
16
lineage4.9;lineage6.3 7
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.6.1.1 2
lineage3.1.2.1 2
lineage2.2.1.2 2
lineage4.1.1.3 2
La3;lineage4.8 1
lineage4.3.4 1
lineage4.3.4.2.1 3
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage4.9 10
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1 20
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9;lineage6.3 8
lineage2.1 3
lineage3.1.2.1;lineage3.1.2.2 1
La1.8.1 1
lineage3 5
lineage2.2.1;lineage4 1
lineage4.1.3 2
lineage1;lineage4.9 1
lineage3.1.2.2 1
lineage4 5
lineage4.6.3;lineage4.9 1
lineage4.1.1.1 1
lineage4.3.2;lineage4.9 1
lineage4.1.2.1 5
lineage2.2.1.2;lineage7 1
lineage4.9;lineage7 2
La3 2
lineage2.2.1.1 4
lineage4.8;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
La3;lineage2 1
lineage2.2.1;lineage4.9 3
lineage6.1.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.7 1
La1.7;lineage4.9 4
La3;lineage2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
lineage2.1;lineage6.3 2
La1.7.1 1
lineage4.3.3 3
La1.2;La1.8.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.5 2
lineage4.4.1.1 1
lineage3.1.1 1
La1.3 1
La2;lineage4.9;lineage9 1
lineage2;lineage4.9 1
M.canetti;lineage4.9 2
lineage4.3.1;lineage4.9;lineage6 1
La1.2 1
lineage4.8.1 1
lineage4.4.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.4.1.1.1 1
lineage4.9.1 1
La3;lineage4.9 1
La1.7;lineage4.9;lineage7 3
lineage2.2;lineage4.9 1
La2;lineage4.9 2
lineage2.2.1;lineage3 1
lineage4.9;lineage9 3
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage3.1 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.7.1;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
spoligotype Counts
spoligotype Count
None 367
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SAMEA3501070 RR-TB lineage4.8 None
SRR6046485 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR20970016 Other lineage2.2 None
SAMEA3501046 RR-TB lineage4.8 None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9117709 Other None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR25827682 Other None
SRR1172857 Other None
SRR7496517 Other None
ERR9787197 Other None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR1196583 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4820798 Other lineage3.1.2.1 gb
ERR978733 RR-TB lineage4.8 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR4817893 Other La3;lineage4.8 None
ERR736817 HR-TB lineage4.3.4 None
ERR4769493 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR978756 Other lineage4.8 None
SRR1180440 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR6046878 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR1140724 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4769433 RR-TB lineage4.9 None
SRR1173633 Other lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR7240476 Other La1.8.1 None
SRR17832802 HR-TB lineage3 None
SRR10315751 MDR-TB lineage4.8 None
SRR1181351 Sensitive lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6046593 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR1173384 Other lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR7496471 Sensitive lineage4 None
SRR3675248 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR978693 Other lineage4.8 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
SRR1181214 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR1172951 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1172728 RR-TB La3 None
SRR1181091 Other lineage2.2.1.1 None
SRR1175049 Other lineage4.8;lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
SRR1180444 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1172234 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR1180391 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797086 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1723552 Pre-XDR-TB lineage2.2.1 cn
SRR1196546 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR1023236 Other lineage6.1.3 None
SRR1915485 Other La1.2.BCG None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180413 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR1180410 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR978760 RR-TB lineage4.8 None
SAMEA3501052 RR-TB lineage4.8 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
SRR1173363 Other None
SRR1184372 MDR-TB None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR4817060 Other None
SAMEA3501065 RR-TB lineage4.8 None
ERR4816852 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR5341373 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR6046385 Sensitive lineage4.9 None
SRR10305982 Pre-XDR-TB lineage2.2.1 None
SRR6824407 Pre-XDR-TB lineage2.2.1 cn
SRR5341330 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1181256 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4818929 HR-TB lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR16156804 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR1173218 Other lineage4.3.3 None
SRR1180226 HR-TB lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR9119669 MDR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR1175487 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR978762 Other lineage4.8 None
ERR4769521 RR-TB lineage4.9 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
ERR2229198 Sensitive lineage4.8 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4817628 Sensitive lineage4.8 gb
SRR1180312 Sensitive lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4815816 Other lineage4.5 gb
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR1196474 Other lineage3.1.1 None
ERR2446566 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4769495 Other La1.3 None
ERR176779 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR2229366 Other lineage4.8 None
ERR4817731 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4819546 HR-TB lineage3 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR10305649 Pre-XDR-TB lineage2.2.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR1175512 Sensitive lineage4.9 None
ERR6198317 Other La1.2 None
ERR3797046 HR-TB lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978750 RR-TB lineage4.8 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR11972367 Sensitive lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR1172817 Other La3 None
SRR6045191 Sensitive lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR212125 HR-TB lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR108125 RR-TB lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR6789626 Other None
SRR7535086 Other None
ERR212001 HR-TB None
ERR752229 Other lineage4.5 None
SRR1180406 Sensitive lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR6046492 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR245758 Other lineage4.9.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR926165 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR4816322 Other lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046133 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1181349 Sensitive lineage4 None
ERR176778 HR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR4816470 HR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR1175052 HR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4814976 Other lineage4.9 None
SAMEA3501063 RR-TB lineage4.8 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
ERR978752 Other lineage4.8 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR978746 RR-TB lineage4.8 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4769452 Other lineage4.9 None