EBG00000313325 - n.87A>G
Drug resistance types
49 Sensitive
18 RR-TB
150 HR-TB
20 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
109 Other
lineage Counts
| lineage | Count |
|---|---|
| 129 | |
| lineage3 | 6 |
| lineage2.2.1 | 25 |
| lineage2.2 | 7 |
| lineage4.4.1.1 | 3 |
| La1.2 | 2 |
| lineage4.3.4 | 2 |
| lineage4.1.2.1 | 4 |
| lineage4 | 31 |
| lineage1.1.2 | 1 |
| lineage4.5 | 3 |
| lineage4.1.3 | 2 |
| lineage4.9 | 68 |
| lineage4.3.2.1 | 1 |
| La1.8.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.8 | 19 |
| lineage2.2.1.2 | 2 |
| lineage4.3.3 | 6 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 4 |
| lineage3.1 | 2 |
| lineage2.1 | 3 |
| La1.7.1 | 1 |
| lineage3.1.3 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage3.1.2.1 | 2 |
| lineage4.6 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4;lineage2 | 1 |
| lineage1 | 1 |
| lineage4.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4;lineage1.1 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage4.4.2 | 1 |
| La1 | 2 |
| La1.3 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 362 |
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4810741 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR5336148 | Other | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4811493 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR736865 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR9117709 | HR-TB | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9119669 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | ERR9787197 | Other | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1169194 | Other | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10305649 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305982 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172310 | HR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172234 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172858 | MDR-TB | lineage4.3.3 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172857 | MDR-TB | None | SRR1173363 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1174897 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175090 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196494 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR15368973 | Other | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR14782405 | HR-TB | None | SRR17832802 | HR-TB | lineage3 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19304036 | HR-TB | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR11081257 | Other | lineage4.8 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4815604 | HR-TB | None | ERR4815249 | Sensitive | lineage4.1.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR176779 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4815310 | Other | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675270 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR1750929 | Sensitive | lineage4.1.1.3 | za | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3416776 | Other | lineage2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR1750881 | Sensitive | lineage4.1.1.3 | zw | ERR181824 | HR-TB | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675311 | Other | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR212001 | HR-TB | None | ERR4816999 | Other | None | ERR212121 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817060 | RR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816470 | Other | lineage3 | None | ERR212138 | HR-TB | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816699 | Other | lineage4.6 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816656 | HR-TB | None | ERR2229366 | Other | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816760 | Sensitive | lineage4.1.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817735 | Other | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4816852 | Other | lineage4.9 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4818988 | Other | lineage1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR234659 | HR-TB | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818394 | Other | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR2513470 | Other | lineage4.2.2.2 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4820290 | Other | lineage3 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR1723552 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5341302 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR1035138 | MDR-TB | None | SRR5341456 | Other | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341313 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341315 | Sensitive | None | ERR4820185 | Sensitive | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045526 | HR-TB | None | SRR5535933 | HR-TB | None | SRR5341333 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR6044855 | Other | lineage4.9 | None | ERR4822150 | Other | lineage4.8 | gb | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6046046 | Other | None | SRR6045053 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502532 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6789626 | Other | None | SRR6824407 | Pre-XDR-TB | lineage2.2.1 | cn | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7496471 | Sensitive | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR7496523 | Other | lineage4.7 | None | SRR7496517 | Other | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7535086 | Other | None | ERR323043 | HR-TB | None | ERR323039 | HR-TB | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR067712 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323045 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283025 | HR-TB | None | ERR1063862 | HR-TB | None | ERR10796596 | Other | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR11049020 | Other | lineage4.8 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR10796630 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283021 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769436 | Other | La1.3 | None | ERR4798262 | HR-TB | La1 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769521 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769450 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None |
|---|
