lineage | Count |
---|---|
lineage4.9 | 4 |
lineage4 | 15 |
49 | |
lineage4.2.1.1 | 1 |
lineage4.1.2 | 1 |
lineage2.2.1 | 1 |
lineage3.1.2 | 1 |
lineage2.2 | 3 |
lineage4.3.4 | 2 |
lineage4.3.2.1 | 1 |
lineage2.2.1.2 | 2 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675280 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675555 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675550 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | SRR5341456 | Other | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR2228859 | RR-TB | lineage4 | None | SRR5341418 | Other | None | SRR5535933 | HR-TB | None | ERR1023509 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046299 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6046824 | HR-TB | None | ERR323045 | HR-TB | None | ERR502889 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323039 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063859 | HR-TB | None | ERR3283028 | Other | None | ERR133986 | HR-TB | None | ERR3283025 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3439432 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR387051 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736834 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | ERR9119669 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | SRR1174897 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR987722 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR14801749 | Sensitive | None | ERR176778 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | ERR176779 | HR-TB | None | ERR181744 | HR-TB | None | ERR158583 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None |
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