Rv0635 - c.-87T>C


Drug resistance types
16 Sensitive 11 RR-TB 60 HR-TB 62 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 83 Other
lineage Counts
lineage Count
lineage4.9 57
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4 3
lineage4.9;lineage6.3 7
lineage4.6.3;lineage4.9 1
La3;lineage4.9 6
12
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La1.7;M.canetti;lineage4.9 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 12
La3;lineage4.8 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.4.1.1.1 1
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 10
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage4.9.1 1
lineage2.1;lineage6.3 1
La3;lineage1.1.2 1
lineage4.8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.2.BCG;La1.8.1 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage3.1.2.2 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La1.7;lineage4.9;lineage7 2
La2;lineage4.9 2
lineage2.2.1.1 4
M.canetti;lineage2.1;lineage4.9 6
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
La3;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.2 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.3.4.2.1 1
La3;M.canetti;lineage2.2.1 1
lineage3 3
lineage2.1 1
La3;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.9 4
lineage4.9;lineage9 3
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1 1
La3;lineage4.3.4 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.3 1
M.canetti;lineage2.1;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.2.1.2 1
lineage2.1;lineage4.3.2 1
La3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.3.4.1 1
lineage2.2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
M.canetti;lineage4.9;lineage9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage1.1.2 1
lineage4.2;lineage4.9 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
lineage1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.7;lineage4.9 1
lineage2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7.1;lineage4.9 1
La1.7 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
spoligotype Counts
spoligotype Count
None 237
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180410 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045053 Other lineage4 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR1184372 MDR-TB None
ERR9117709 Other None
SRR1180406 Sensitive lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341330 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR245758 Other lineage4.9.1 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR1169194 Other lineage4.9 None
ERR926165 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1175487 Sensitive lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045347 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1184294 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1181091 Other lineage2.2.1.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR6046594 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR7535086 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR18213713 HR-TB None
ERR987722 MDR-TB None
SRR25827682 Other None
SRR28119805 Other lineage4.9 None
ERR4816999 Other None
SRR1196768 MDR-TB None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
ERR702406 Other lineage2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR990545 RR-TB lineage3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4816656 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180413 Sensitive lineage4.9 None
SRR1172817 Other La3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11465152 Sensitive lineage4.3.4.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR161037 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR971389 Other lineage4.9 None
SRR1184381 MDR-TB None
ERR212001 HR-TB None
SRR3675236 Other None
SRR1196583 Other lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044942 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1181349 Sensitive lineage4 None
SRR7240033 Other La1.2;La1.8.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4819877 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1183111 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR926164 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR1165628 Other La3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None