Rv3596c - c.2034T>G
Drug resistance types
4 Sensitive
6 RR-TB
42 HR-TB
12 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 1 |
| La1.8.1 | 2 |
| lineage2.2 | 3 |
| lineage4.9 | 50 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2.1 | 8 |
| lineage4 | 3 |
| La1.7;lineage4.9 | 3 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage7 | 3 |
| lineage4.8;lineage4.9 | 2 |
| lineage3.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.3.4 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1;lineage4 | 1 |
| 1 | |
| lineage2.1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR7535082 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR6045347 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR6044835 | Other | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR176651 | Other | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR6046046 | Other | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR2513444 | Other | lineage1.1.3.1 | gb | SRR5341461 | HR-TB | lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR20970016 | Other | lineage2.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | ERR1063896 | HR-TB | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR3675270 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None |
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