Rv0668 - c.2940G>C
Drug resistance types
69 Sensitive
4 RR-TB
125 HR-TB
3 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| 92 | |
| lineage4.9 | 50 |
| lineage4.1.1.3 | 1 |
| lineage4 | 68 |
| lineage3 | 5 |
| lineage4.8 | 1 |
| lineage1.1.1 | 3 |
| lineage4.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage2.2.1 | 10 |
| lineage4.6.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3.1 | 2 |
| lineage4.7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 6 |
| La1 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 2 |
| La1.3 | 1 |
| lineage4.5 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 269 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675387 | Sensitive | None | SRR3675547 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675510 | Other | None | SRR3675522 | Other | None | ERR212123 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675545 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816470 | Other | lineage3 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816656 | HR-TB | None | ERR718381 | Sensitive | lineage1.1.1 | th | ERR2446566 | Other | lineage4.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341456 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341299 | Sensitive | lineage4 | None | ERR1035138 | MDR-TB | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341315 | Sensitive | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693239 | HR-TB | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6325442 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046397 | Other | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6325447 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR294248 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR4831638 | Sensitive | None | ERR323036 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR5311099 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7535082 | Sensitive | lineage4 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797083 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4797313 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769514 | Other | La1.3 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4797474 | Other | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR6359066 | HR-TB | lineage4 | None | ERR4812155 | Sensitive | None | ERR6358837 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9119669 | HR-TB | None | ERR8976043 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR20632814 | Sensitive | lineage4 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4815310 | Other | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675486 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR5710008 | Sensitive | lineage1.1.1 | th | SRR3675247 | Other | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675279 | Other | None | SRR3675312 | HR-TB | lineage4 | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | SRR3675383 | HR-TB | None | ERR181887 | HR-TB | None |
|---|
