Rv0668 - c.39T>C


Drug resistance types
65 Sensitive 7 RR-TB 73 HR-TB 24 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 107 Other
lineage Counts
lineage Count
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9 9
lineage4.9 115
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.2.1 1
lineage4.2;lineage4.9 2
lineage2.2.1.2;lineage7 1
La1.7 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.2.1 16
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage4.9;lineage9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.3.4.2.1 3
4
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.1.2 1
lineage2.2 5
M.canetti;lineage4.2;lineage4.9 2
lineage4.1.2.1 4
La1.6;La3;lineage4.9 1
lineage3 2
lineage1.2.1.1 1
lineage4.8 2
lineage4.6.2.2 2
lineage4 5
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.3.2.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.2.1.1 4
La1;lineage4.9 2
lineage1.1.3.1 1
La1;lineage4.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La1.2.BCG 1
M.canetti;lineage4.9 6
lineage4.6.3;lineage4.9 2
La1.7;M.canetti;lineage4.9 3
lineage4.9;lineage7 3
lineage4.1;lineage4.8 1
lineage1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 1
lineage4.5 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.1.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La2;lineage2.2 1
lineage4.3.1;lineage4.9;lineage6 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage4.2 1
lineage4.9;lineage6.3 1
lineage1.1.1;lineage4 1
lineage4.8;lineage4.9 2
La1.8.1 2
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage1.1.2 1
La2;lineage4.9 1
lineage4.1.1.2 1
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.9;lineage9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2.1;lineage4.1.2.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
spoligotype Counts
spoligotype Count
None 283
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675477 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR2512770 Sensitive lineage4.2.1 None
SRR7535082 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR3675222 Other La1.7 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4811030 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR387051 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR1063896 Sensitive None
ERR400320 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1159378 Other lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR702405 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR3675473 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
ERR4798099 Other lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR2446566 Other lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4178226 Sensitive lineage4 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4797184 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR6865513 Other lineage4.1.2.1 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR6359074 HR-TB lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR751326 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR323037 Other lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR13230594 Sensitive lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR3797046 HR-TB lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR4797264 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4797474 Sensitive lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4796254 Sensitive lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1175127 Other lineage2.2.1.2 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR161037 Other lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4815441 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR3273109 HR-TB lineage4 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046594 Sensitive lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR29050859 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR29097066 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR5341299 HR-TB lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR212001 HR-TB None
SRR5431730 Other La1.8.1 None
ERR4819422 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046878 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1180137 Other lineage2.2.1 None
ERR4818929 HR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR502511 Sensitive lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046046 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6045548 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675260 Sensitive lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR990545 Other lineage3 None
SRR7535086 Other None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR176751 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR9971112 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR20970016 Other lineage2.2 None