Rv3596c - c.1915C>T


Drug resistance types
80 Sensitive 62 RR-TB 127 HR-TB 148 MDR-TB 9 Pre-XDR-TB 3 XDR-TB 183 Other
lineage Counts
lineage Count
lineage4.9 224
lineage4.1.1.1 1
lineage1.1.2;lineage4 1
lineage2.1;lineage4.9 6
M.canetti;lineage2.2 3
M.canetti;lineage4.9 7
lineage2.2.1 34
lineage2.2 5
lineage2.2.1.2 2
lineage4.1.2.1 20
lineage4.1.1.2 1
lineage2.1;lineage2.2;lineage6.3 1
La1.2 2
lineage4.8;lineage4.9 2
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage2.1;lineage4.9 24
lineage4.3.4.2.1 3
M.canetti;lineage2.1;lineage4 1
lineage4.4.1.1 2
lineage6.1.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La2;lineage2.2 1
lineage4 4
lineage2.2.2 3
lineage2.2.1;lineage3;lineage4 1
lineage4.1.1.3 5
lineage4.9.1 1
lineage4.8 6
La1.7.1 2
lineage4.1.2 1
La3;M.canetti;lineage4.9 2
La1.8.1 4
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La1.7;lineage4.9 10
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 12
La3;lineage4.9 13
lineage3 16
lineage4.6.3;lineage4.9 3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.1;lineage4.8 2
lineage1.1.2 2
La1.2;La1.8.1 1
lineage2.1;lineage4.9;lineage6.3 3
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.6.2.2 5
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage1.2.1.2 1
La2;lineage4.9 2
lineage4.1.2.1.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.2;lineage4.6.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage5.2 2
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La1;lineage4.1.2 1
lineage4.9;lineage7 2
lineage4.2;lineage4.9 3
lineage2.2.1.1 4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage1.2.1.2.1 1
lineage4.3.3 7
lineage4.2.1.1;lineage4.3.3 1
lineage3.1.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 2
lineage1.2.1.1 1
lineage4.2.1 2
lineage4.9;lineage6.3 2
La1;lineage4.9 4
La1;lineage2;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9;lineage9 3
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.9;lineage6.1.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage1;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.5 3
M.canetti;lineage1 1
lineage4.3.2.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1 1
lineage2.2.1;lineage4.1.2.1 1
lineage6.1.2 1
La1.7;lineage4.2 1
M.canetti;lineage4.2 1
La1.2.BCG 1
La1.7;M.canetti;lineage4.9 5
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7;lineage4.9;lineage7 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.3.4.1 3
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La3;lineage4.3.4 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1.1;lineage4 1
M.canetti;lineage2.1;lineage3 1
9
lineage3.1;lineage9 1
lineage1.1 1
lineage4.1.1.3;lineage4.9 2
La3;M.canetti;lineage3.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage5.1.4 1
M.canetti;lineage4.9;lineage9 1
lineage1.1.3.1 1
La1.7;lineage4.9;lineage6 1
lineage4.7 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 612
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675502 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR363449 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR176651 Other lineage4.9 None
SAMN02585910 RR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR4819357 Sensitive lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR23961549 Other La1.2 None
SRR5341330 Other lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4798099 HR-TB lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR363421 Other lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR369151 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR2446118 RR-TB lineage4.1.2.1 nl
ERR702405 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR4816964 HR-TB lineage4.9 None
ERR212033 Other lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675265 Other lineage4 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6046878 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR245758 Other lineage4.9.1 None
SRR5535933 Other lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR15014682 MDR-TB lineage4.8 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR12015086 RR-TB lineage4.8 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR6045832 Other lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR20969731 Other lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR1791696 RR-TB La1.8.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1181251 Other lineage2.2.1 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4818536 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR349265 Other lineage4.9 None
ERR373946 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR6046897 Sensitive lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
SRR7236177 Other La1.8.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR6511621 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR751326 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR176779 HR-TB lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR069981 HR-TB lineage2.2.2 None
ERR323107 HR-TB lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12006550 Other lineage1.2.1.2 None
ERR176751 HR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR3675387 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR8665994 RR-TB lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363502 Other lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9119500 MDR-TB lineage5.2 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341455 Sensitive lineage4.9 None
SRR13861396 HR-TB lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR6198317 Other La1.2 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR3468607 RR-TB lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4813861 Other lineage4.3.3 None
ERR779852 HR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR3675507 RR-TB lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR12015085 Other lineage4.8 None
ERR400320 Sensitive lineage4.9 None
ERR2514821 Other lineage2.2.1 None
ERR9786076 Other lineage3 None
SRR3675270 Other lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR6831950 Sensitive lineage4.3.3 None
SRR3675473 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
ERR176741 Other lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
ERR990545 RR-TB lineage3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6045548 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR5341384 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR3675548 Sensitive lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR1175052 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
ERR4811030 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3283011 Other La3;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3797085 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1166821 RR-TB lineage4.1.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR5917710 RR-TB lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1035122 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
ERR2517489 Sensitive lineage4.1.2.1 nl
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR1063858 HR-TB lineage4.9 None
ERR12015084 Other lineage4.8 None
ERR736831 Other lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3801503 Other lineage4.6.2.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR4798139 RR-TB lineage1.1.2 None
SRR3675229 Sensitive lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6044876 Sensitive lineage4.9 None
ERR2515100 Sensitive lineage3 gb
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797086 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR21732954 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR6045191 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
SRR23961559 Other La1.7;lineage4.2 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SRR7069881 Sensitive lineage3 None
SRR9971114 Other lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR069978 HR-TB lineage2.2.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR1165506 Other lineage4.1.2.1 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR3283055 HR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
ERR363474 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9896144 Other lineage3 None
SRR7535082 Other lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12142339 HR-TB lineage2.2.1 None
ERR3275220 Other lineage3 nl
ERR363506 Sensitive lineage4.9 None
SRR1238559 Other lineage4.9 None
SRR6832787 Other lineage2.2.1 None
ERR4816151 Other lineage4.8 None
SRR3675455 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6046245 Other lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4816470 HR-TB lineage3 None
SRR5341308 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797063 Other La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR1175508 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR349264 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR3675585 HR-TB lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2229143 RR-TB lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR6045706 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4796254 Other lineage4.9 None
ERR323037 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1183111 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR2446144 Other lineage3 nl
SRR9971112 HR-TB lineage2.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR5341453 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR363445 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341437 Sensitive lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR3797046 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR13861332 Other lineage4.9 None
ERR2509673 Other lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1023509 MDR-TB lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR6359082 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR5341299 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR349266 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR20970016 Other lineage2.2 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR11252664 Other lineage2.2.1 None
SRR18289200 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9786843 Other None
SRR28351584 HR-TB lineage2.2.1 None
ERR11252736 Other lineage4.9 None
ERR2514692 Other None
ERR987722 MDR-TB None
ERR212001 HR-TB None
ERR4407463 HR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045795 Other lineage2.2.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR137286 Other lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR736834 HR-TB lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR6046594 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
ERR400529 Other lineage3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
ERR473323 HR-TB lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1238558 Other lineage4.9 None
ERR11465152 Sensitive lineage4.3.4.1 None
SRR3675243 MDR-TB lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675260 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR11662690 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR5341469 HR-TB lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR181824 MDR-TB lineage4.9 None
ERR363446 Other lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR1640750 RR-TB None
ERR4796577 HR-TB None
SRR12708416 Sensitive None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR12328189 Sensitive lineage2.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None