Rv3457c - c.108T>C
Drug resistance types
109 Sensitive
11 RR-TB
63 HR-TB
13 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 85 |
| lineage4.9 | 59 |
| lineage3 | 5 |
| 56 | |
| La1.8.1 | 4 |
| lineage4.1.2.1 | 7 |
| lineage5.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 2 |
| lineage2.2 | 3 |
| lineage2.2.1 | 11 |
| lineage4.5 | 2 |
| lineage1.1.3.1 | 1 |
| lineage5.2 | 3 |
| lineage4.8 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1 | 3 |
| lineage4.1.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.6.5 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 263 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323107 | Other | lineage4 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR323066 | Sensitive | lineage4 | None | ERR017781 | Other | lineage3 | None | ERR1023525 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR3283028 | Other | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3797048 | HR-TB | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769450 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769427 | Other | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798431 | HR-TB | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811030 | Sensitive | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6358979 | Other | None | ERR6358951 | HR-TB | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR752229 | Other | lineage4.5 | None | ERR6866410 | Sensitive | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR22424727 | MDR-TB | lineage3.1.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR2229541 | Other | lineage4.8 | None | SRR3675510 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816852 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341300 | Other | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5431730 | Other | La1.8.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341456 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR6045503 | HR-TB | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2706950 | MDR-TB | lineage5.2 | cd | ERR2660539 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR5818665 | Other | lineage4.6.5 | dj | SRR6045892 | Sensitive | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046492 | Other | None | SRR6046299 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831638 | Sensitive | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502943 | HR-TB | None | ERR4831792 | MDR-TB | lineage4;lineage2.2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6855722 | Sensitive | lineage2.2.1 | None | SRR8217918 | HR-TB | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None |
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