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SRA data
Rv0682
- c.300T>C
Drug resistance types
171 Sensitive
24 RR-TB
113 HR-TB
57 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
132 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
221
lineage2.2.1
25
M.canetti;lineage2.1;lineage4.9
24
lineage4.3.2
19
lineage4.1.2.1
18
La3;lineage4.9
14
La3;M.canetti;lineage2.1;lineage4.9
12
lineage4
7
lineage4.3.3
7
lineage2.1;lineage4.9
7
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
508
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR025450
Sensitive
lineage4.3.2
nl
ERR025453
Sensitive
lineage4.3.2
nl
ERR025454
Sensitive
lineage4.3.2
nl
ERR025455
Sensitive
lineage4.3.2
nl
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1023502
MDR-TB
lineage2;lineage4
None
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
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