Rv0682 - c.300T>C
Drug resistance types
161 Sensitive
23 RR-TB
112 HR-TB
56 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
127 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 206 |
| lineage4.3.3 | 7 |
| M.canetti;lineage2.1;lineage4.9 | 24 |
| La2;lineage2.2 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| lineage2.2.1 | 24 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.9;lineage7 | 5 |
| lineage2.2.1;lineage4 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage4.8.1 | 1 |
| M.canetti;lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| La3;lineage4.9 | 14 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.8 | 2 |
| lineage2.1;lineage4.9 | 7 |
| lineage4 | 7 |
| 5 | |
| lineage4.3.2 | 18 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage1.1.2;lineage4 | 1 |
| La3;lineage4.3.4 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage4.1.2.1 | 18 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2.1.2 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage5.1.4 | 1 |
| lineage2.2 | 3 |
| lineage3 | 7 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage4.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| La3;M.canetti;lineage4.9 | 2 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.2 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1;lineage4.9 | 2 |
| La1.2;La1.8.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage1.2.2.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage3;lineage4 | 1 |
| La1.4 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2;lineage4 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.8.1 | 3 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4 | 1 |
| La3;lineage4 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 490 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR369158 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR29096935 | Sensitive | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR8692887 | Other | None | ERR025455 | Sensitive | lineage4.3.2 | nl | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4817692 | HR-TB | lineage1.1.2;lineage4 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR2206625 | Sensitive | lineage4.3.2 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR16058176 | HR-TB | lineage4.3.2 | None | ERR400326 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR3675318 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4195235 | Sensitive | lineage4.3.2 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR176751 | Other | lineage4.9 | None | SRR29096873 | Sensitive | lineage4.9 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR21732954 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4813861 | Other | lineage4.3.3 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR212001 | HR-TB | None | ERR212033 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR29126406 | RR-TB | lineage2.2.1 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR3675243 | Other | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9121688 | Sensitive | lineage4.3.2 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR18289200 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180250 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR2206624 | Sensitive | lineage4.3.2 | None | ERR3797083 | RR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR7851312 | Other | La1.2 | None | ERR2693228 | RR-TB | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR13292526 | Other | lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR3675269 | RR-TB | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4188350 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR11050424 | RR-TB | lineage4.3.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR6044835 | Other | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR13861332 | Other | lineage4.9 | None | ERR2861344 | Sensitive | lineage4.3.2 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR4383951 | MDR-TB | lineage4.3.2 | None | SRR16278274 | Other | La1.4 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708416 | Sensitive | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2861343 | Sensitive | lineage4.3.2 | None | ERR9125712 | HR-TB | lineage4.3.2 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR28351488 | MDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR6044815 | Other | lineage4.9 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR1640750 | Other | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR6046878 | Other | lineage4.9 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR6866807 | Other | lineage4.9 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR025450 | Sensitive | lineage4.3.2 | nl | SRR1181325 | Sensitive | lineage4.9 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR3468607 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675270 | Other | lineage4.9 | None | SRR3675507 | Other | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR4830685 | MDR-TB | lineage4.3.2 | dz | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR9121695 | Sensitive | lineage4.3.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR3675482 | Other | lineage4.9 | None | ERR025454 | Sensitive | lineage4.3.2 | nl | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR4821053 | RR-TB | lineage3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1166821 | Other | lineage4.1.2.1 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR4178226 | Sensitive | lineage4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR161037 | Other | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR025453 | Sensitive | lineage4.3.2 | nl | ERR6865513 | Other | lineage4.1.2.1 | None | ERR349299 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR1791696 | Other | La1.8.1 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR6046376 | Other | lineage3 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR4195602 | Sensitive | lineage4.3.2 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR2206618 | Sensitive | lineage4.3.2 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6831950 | Sensitive | lineage4.3.3 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR28868381 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675487 | Other | M.canetti;lineage4.9 | None | SRR7240492 | HR-TB | La1.7.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR1175513 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4796577 | HR-TB | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR13861224 | Sensitive | lineage4.9 | None |
|---|
