Rv0486 - c.372C>T


Drug resistance types
30 Sensitive 11 RR-TB 71 HR-TB 63 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 124 Other
lineage Counts
lineage Count
lineage4.9 46
lineage4.5 1
lineage4 3
La2;lineage4.9;lineage9 1
lineage2.2 1
M.canetti;lineage2.1;lineage4.9 24
lineage4.4.1.1.1 36
28
lineage6.1.2 11
lineage4.1.2.1 7
lineage2.2.1 15
lineage4.1.1.1 2
lineage2.1;lineage4.9 18
lineage2.1;lineage6.3 2
La3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 5
lineage2.2.1.1 2
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage4.4.1.1 4
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1.2 3
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
La3;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
lineage4.3.4.2 1
lineage1.1 1
La1.8.1 2
lineage4.1.1.3 1
lineage3 7
lineage4.3.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.6.1 1
La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.8 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1 4
La1.7.1 1
lineage4.8.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La1.7;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 1
lineage4.1.3 3
lineage3.1.2.2 1
lineage4.1.2.1.1 1
lineage6.3.1 1
lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage3.1.2.1 1
lineage1.1.2;lineage4 1
lineage4.1.1;lineage4.9 1
lineage4.1.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
lineage2.2.1;lineage4.4.1.1.1 1
M.canetti;lineage2.2 1
lineage4.9;lineage9 2
La1.7;lineage3.1;lineage4 1
La1.7;lineage4.3.4.1 1
lineage1.1.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.7 1
La1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 306
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR13861153 Other lineage4.9 None
SRR13423544 Other lineage4.5 None
ERR3283044 Other lineage4 None
ERR3283032 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR8976043 HR-TB lineage2.2 None
SRR13861332 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971098 Sensitive lineage4.4.1.1.1 None
ERR9117721 HR-TB None
ERR3803779 Sensitive lineage6.1.2 None
ERR9786627 Other lineage4.1.2.1 None
SRR7535086 Other None
SRR20969731 Other lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR7737804 MDR-TB lineage4.4.1.1.1 None
SRR6325447 HR-TB lineage4.1.1.1 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
SRR29096150 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR176751 Other lineage4.9 None
SAMN02053794 MDR-TB lineage4.4.1.1.1 za
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6855815 MDR-TB lineage4.4.1.1.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR7496472 Other lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
SRR6789621 Other lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR7911441 MDR-TB lineage4.4.1.1.1 za
ERR439986 Sensitive lineage6.1.2 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR11342697 MDR-TB lineage4.4.1.1.1 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR1173633 Other lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR552721 Sensitive lineage4.4.1.1 de
ERR2199987 Sensitive lineage4.4.1.1 de
ERR9786604 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR9971003 MDR-TB lineage4.4.1.1.1 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29096410 Other lineage4.9 None
SRR10315711 MDR-TB lineage4.4.1.1.1 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1175127 Other lineage2.2.1.2 None
ERR9787286 Sensitive lineage6.1.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR15368973 Other lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
ERR176549 Other lineage4.3.4.2 None
ERR3283030 HR-TB lineage4.9 None
ERR3077978 Other lineage1.1 None
ERR4800341 Other None
ERR3797023 HR-TB La1.8.1 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4821053 Other lineage3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR6358755 Other lineage4.6.1 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9787051 Sensitive lineage6.1.2 None
ERR4820854 Other lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11349174 MDR-TB lineage4.4.1.1.1 None
SRR13861400 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4817893 Other lineage4.8 None
SRR9971312 MDR-TB lineage4.4.1.1.1 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR20970016 Other lineage2.2.1 None
SRR9971049 MDR-TB lineage4.4.1.1.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR20969708 HR-TB lineage2.2.1 None
SRR1172728 RR-TB La3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816585 Other lineage2.2.1 None
ERR702406 Other lineage2.1 None
ERR9787138 Sensitive lineage6.1.2 None
SAMN02350479 Pre-XDR-TB lineage4.4.1.1.1 za
SRR10315560 Sensitive lineage4.4.1.1.1 None
SRR7240492 HR-TB La1.7.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR6045043 Sensitive lineage3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR7240033 Other La1.8.1 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR9787136 Sensitive lineage6.1.2 None
SRR1019141 Pre-XDR-TB lineage4.4.1.1.1 None
ERR13288981 MDR-TB lineage4.4.1.1.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR29097037 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR1184381 MDR-TB None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
SRR1140936 Pre-XDR-TB lineage4.4.1.1.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR11488990 MDR-TB lineage4.4.1.1.1 None
SRR2101606 Sensitive lineage4.4.1.1.1 None
ERR4816336 Sensitive lineage3 gb
SRR1173453 Other lineage4.4.1.1 None
SRR3675243 Other lineage4.9 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR4830478 MDR-TB lineage4.4.1.1.1 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4797054 Pre-XDR-TB lineage2.2.1.2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3416776 Other lineage2.1 None
ERR3797083 RR-TB lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR833102 MDR-TB lineage4.4.1.1.1 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816999 Other None
SRR28046343 RR-TB lineage3 None
ERR4796670 Sensitive lineage3 in
SRR6789626 Other None
ERR4810741 HR-TB None
ERR9992613 Pre-XDR-TB lineage4.4.1.1.1 None
ERR2660539 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR502912 Other lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR6358991 HR-TB None
ERR4830495 MDR-TB lineage4.4.1.1.1 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR7737723 MDR-TB lineage4.4.1.1.1 None
ERR4811075 Other None
ERR4811311 Other None
SRR1196546 Other lineage4.9 None
ERR9787281 Sensitive lineage6.1.2 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9787139 Other lineage6.3.1 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR11349200 MDR-TB lineage4.4.1.1.1 None
SRR10315715 MDR-TB lineage4.4.1.1.1 None
SRR12142341 HR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR12416824 HR-TB None
ERR987729 HR-TB lineage3.1.2.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR20969677 HR-TB lineage2.1 None
ERR4816466 HR-TB lineage4.9 None
ERR9787068 Sensitive lineage6.1.2 None
SRR18003019 Other lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR9786998 HR-TB lineage4.1.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
SRR6785267 Other lineage2.2.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR9117709 Other None
ERR3804035 Sensitive lineage6.1.2 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR9970978 Sensitive lineage4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR473332 Other lineage4.9 None
SRR833044 MDR-TB lineage4.4.1.1.1 None
SRR7496509 Other None
SRR6458421 MDR-TB lineage2.2.1 None
SRR29097026 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4817538 Sensitive lineage3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9787197 Other None
ERR234659 Other None
ERR7911201 MDR-TB lineage4.4.1.1.1 za
ERR7911202 MDR-TB lineage4.4.1.1.1 za
SRR1184372 MDR-TB None
ERR3283048 Other lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR13289765 Sensitive lineage3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR10315714 MDR-TB lineage4.4.1.1.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3803998 Sensitive lineage6.1.2 None
SRR18213713 HR-TB None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR13289258 MDR-TB lineage4.4.1.1.1 None
ERR4815604 Other None
ERR13289003 Sensitive lineage2.2.1;lineage4.4.1.1.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR10315713 MDR-TB lineage4.4.1.1.1 None
ERR3797069 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR6981971 Sensitive lineage4.4.1.1.1 None
ERR3806831 Sensitive lineage6.1.2 None
SRR1196494 MDR-TB None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR176793 Other lineage4.1.1.1 None
SRR10809074 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR4797201 Other None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR4811105 HR-TB None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4811142 RR-TB None
ERR4797193 HR-TB lineage1.1.2 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Sensitive lineage4.7 None
SRR10808805 Other La1;lineage4.9 None
SRR11342645 MDR-TB lineage4.4.1.1.1 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None