lineage | Count |
---|---|
lineage7;lineage2.2.1.2 | 1 |
lineage2.2 | 2 |
lineage2.2.1 | 4 |
29 | |
lineage4 | 9 |
lineage2.1 | 1 |
lineage4.1 | 1 |
lineage4.9 | 5 |
lineage4;lineage3.1 | 1 |
La1.2 | 1 |
La1.3 | 1 |
lineage4.3.4 | 1 |
lineage2.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 57 |
ID | Drug resistance | Lineage | Country iso2 | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | ERR181824 | HR-TB | lineage4 | None | ERR176779 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675510 | Other | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816656 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818929 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341456 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6046878 | HR-TB | lineage4 | None | SRR5535933 | HR-TB | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | SRR6044780 | Other | lineage4.9 | None | ERR323045 | HR-TB | None | ERR4831117 | HR-TB | None | ERR1034634 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR1063859 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769450 | HR-TB | None | ERR3797043 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796613 | Pre-XDR-TB | lineage2.2.1 | in | ERR4769506 | Sensitive | La1.3 | None | ERR4797975 | Pre-XDR-TB | lineage2.2.1 | in | ERR4811493 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None |
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