EBG00000313339 - n.1801C>T


Drug resistance types
18 Sensitive 2 RR-TB 25 HR-TB 9 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 22 Other
lineage Counts
lineage Count
lineage2.2.1 4
lineage4.9 39
lineage4.1.2.1 3
La1.7;lineage4.9 3
La1.7.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1.2 2
lineage6.1.2 1
lineage2.2.1;lineage4.9 1
lineage2.2 4
La2;lineage2.2 1
La1.7;lineage4.9;lineage7 3
lineage2.1;lineage4.9 1
lineage4.4.2 1
lineage4.9;lineage7 1
lineage4.3.4 1
lineage4.5 1
lineage2.2;lineage4.9 1
La2;lineage4.9 1
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.4.2.1 1
La1.8.1 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.4.1.1 1
lineage4.8 1
spoligotype Counts
spoligotype Count
None 78
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4769457 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR176778 HR-TB lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR3797080 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6045548 Sensitive lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR1063849 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR6359082 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR15315989 Sensitive lineage4.5 None
SRR20969708 HR-TB lineage2.2 None
SRR20969731 Other lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR176779 HR-TB lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR3283010 Sensitive La1.8.1 None
SRR14782405 HR-TB lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4818110 Sensitive lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR3797019 Other La1.8.1 None