EBG00000313339 - n.1801C>T
Drug resistance types
18 Sensitive
2 RR-TB
25 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 1 |
| lineage4.9 | 39 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2.2.1 | 4 |
| lineage4.4.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2 | 4 |
| lineage4.5 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage2.1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage6.1.2 | 1 |
| lineage2.2.1.2 | 2 |
| La2;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| La1.8.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6359082 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR15315989 | Sensitive | lineage4.5 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR3283010 | Sensitive | La1.8.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR11662690 | HR-TB | lineage4.9 | None |
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